Oncorhynchus kisutch (coho salmon): 109910322
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Entry
109910322 CDS
T09179
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109910322
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
109910322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109910322
NCBI-ProteinID:
XP_020365068
Ensembl:
ENSOKIG00005022170
UniProt:
A0A8C7H462
LinkDB
All DBs
Position
LG19:7371951..7378564
Genome browser
AA seq
757 aa
AA seq
DB search
MIEKIGYSAATMLGTPTSTKQGTRENSMLFEMSRISPLLFEDTPELISSVAPDTVEGCKK
KKKKKTKALSEQGSEEPAIEHNQNGHQLTVEKRGEEPKHKEQTVTVVEKERKKLKKGKQE
KQLNVVHSEMEVPDPEEQTGGKTKKKSNNLQTQQVGAEGVTADVKNMNSRKNKRKHNNIE
PERRIDSVLSKAAVDVSAVAAPDEARKSKKKHKNRQTELEEGAESCLTVSRTAEDPEIIE
LHTETVKSGERMVTEAAENVKEKRKQNKKKHGESELNDCPDKADLPGIKEQAVRKLKSKR
PKSDGESAAVEGSGRKKKQRRESDKGMDSVHSAADVLDLTVPNDNRTHDAGTNSETEEGA
HSVIETGTQHNKPCLNEETLSVDDWQALKDLKDFIPNVESKSVDEIRKMIKYDLDRFKEF
RRQGLSLRSGRFNVQENERLRSNVYNFLSLTGIQSGSELFHPQRFKEGEANIKKLKCQHR
FHERIGEGIPRPWHQVYIRGRKMFDDRNYKGRFTKEELHSLKKLQTLHGNRWAKISQLTG
RSESSLEKRFAQMSANRGVWTEEELKRLMEAVRKHLVGQAEPGSGPTTVRKDQLYNNIPW
TDVCQAVETRHWSQCRIKWLDVLKHKMACGQPVFSGGTQSLQGKVDLIKALNAMQIEDAA
DINWEEIAYTIGDVTPRYIQTHYYRLKVASVPMWQSMSFCEIIDFLNSRVLPNFEERLQV
LINSGEMVSRNDPQELFLLSEIFDNEDSDYYSEVQNS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgatagagaaaataggatattctgcagccaccatgctagggactccaacatccaccaaa
caagggacacgtgagaattccatgttgtttgagatgtctcgaatatcccctcttctattt
gaagacactcctgaattaatctcatcagtggcacctgatacagtcgagggatgcaaaaag
aagaaaaagaaaaagactaaagcactatctgaacagggatcagaagaacctgcaattgag
cataatcaaaatggtcaccagttgacagtagagaaaaggggtgaagaacctaaacataaa
gagcaaacagtaaccgtggtggagaaggagaggaagaaactcaaaaaaggaaagcaagag
aagcagctaaatgttgttcacagtgaaatggaggtaccagatcctgaggaacaaactggt
gggaaaacaaagaaaaagtcaaataatcttcaaacacaacaggtgggagcagagggagtg
actgctgatgtgaagaatatgaatagccggaagaataagagaaaacataataacattgag
ccagaacggaggatagacagtgtcctctcaaaggctgcagtagacgtttcagctgtagct
gcgccagatgaggccagaaagagtaagaagaagcacaagaacagacaaacagaacttgaa
gagggagcggaaagctgtctgacagtttcaagaacagcagaggatccagaaatcatagaa
ctgcacactgaaacagtcaagagtggtgaacgtatggtaactgaggcagcggagaacgta
aaagagaagaggaaacaaaataagaaaaaacacggagagagtgaactgaatgattgtcca
gataaagcagaccttccaggtataaaagaacaagctgtaagaaaattgaagtcaaagagg
ccgaaatcagatggagagtctgcagctgtggagggcagcgggagaaagaaaaaacaacgc
agagagtcagacaagggaatggacagtgtccactctgcagcagatgttttggatttaact
gttccaaatgacaacaggactcatgatgctggaacgaacagtgagacagaggagggcgcc
cattcagtcattgagacagggacccaacacaacaaaccctgcctaaacgaagaaactcta
agtgtggacgactggcaggctctgaaggatctcaaagatttcattcccaacgttgagtca
aagtctgttgacgagatccgtaagatgataaagtatgatcttgatcgattcaaggaattc
cgaagacaaggcctttccctgcgaagtggaagattcaatgtgcaggagaacgaacgactc
aggagtaatgtctacaacttcctgtctctcactgggattcagagtggctctgagctcttc
catccacagcgcttcaaagagggagaagcaaatatcaagaaattgaagtgtcagcacaga
ttccatgaaagaataggtgaaggaatacccaggccttggcatcaagtctatattcgtggg
aggaaaatgtttgatgaccgcaactacaagggcaggttcaccaaagaagagcttcactct
ttgaaaaaactgcagacgttgcacggcaacaggtgggcgaagatctcgcagttgactggc
cgaagcgaatcgtccctggagaaacgtttcgctcaaatgtctgcaaacagaggcgtgtgg
accgaggaagaactgaaaagactaatggaagctgtgcggaagcacctggtgggacaggca
gagcctggcagtggaccaaccaccgtcaggaaagaccagctgtacaacaacatcccctgg
acagatgtgtgccaggcggttgaaacgcgccactggtcccagtgtcgaataaaatggttg
gatgttttgaagcacaaaatggcatgtggacaaccagtattcagtggcggcacacaatcc
ttacagggcaaagtggatttgatcaaagcgttgaatgcaatgcagatagaagatgctgca
gatatcaactgggaagaaattgcttacacaattggggatgtcacgccgcgctacattcag
acacattactacaggttaaaagtagccagcgttccgatgtggcagagcatgtccttctgt
gagatcatcgacttcctcaacagtagagttctccccaattttgaagagcgcctccaagtt
ctgataaactcaggagagatggtctccagaaacgatcctcaagagctctttctcctctct
gagatctttgataatgaggacagcgactactacagcgaggttcagaacagttaa
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