Oncorhynchus kisutch (coho salmon): 109910358
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Entry
109910358 CDS
T09179
Name
(RefSeq) optineurin-like isoform X1
KO
K19946
optineurin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109910358
04137 Mitophagy - animal
109910358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109910358
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109910358
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
109910358
Autophagy
Mitophagy
PINK1-Parkin associated proteins
109910358
Xenophagy
Cargo receptors
109910358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
CENP-F_leu_zip
DUF4248
zf-C2H2
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
109910358
NCBI-ProteinID:
XP_020365125
Ensembl:
ENSOKIG00005037385
UniProt:
A0A8C7JAU0
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All DBs
Position
LG19:9212902..9226672
Genome browser
AA seq
552 aa
AA seq
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MASSSPMVNGDVSRGPSSHPGHSPTTGTLEETLQQMNRLIQENRDLKEALKQTNMSMKER
FEGLSVWREKQREEKEFLEERLDEARGRVEALSSHNQELSMKVEELEGEGKGQAETTNQN
AELEALHAQLVRLQAEKSDLVAMNSELQLKTGQGSEDDSFIEIRIARDDTGKDLYHNERD
PRYDMSVSRQESEELTVSQLLQSLRKETQRVERLQIELQATRSRITELEEKEINTESSTQ
TSLLPEVVSPALANTACGTEPEPEEEPQQNSGKDKAASEVEDLKDQMMTLFNELQQAQSK
LDEAEGLKMNLQDRCRDVERDVVTLKAQLVEKQEVQSENDRLKLQVDSMKAQNQLEQRKA
GEERTNLTQLKDAYTKLFEDYNELKQESKNREPLVTKEVGDLQTRLDAAEKALAAKQQQI
DVMKQEIFQKEKELETISVFQAQAEVYSSDFYAERAAREKIHEEKERLFAQLEFVKKQNT
QLQDEIDSLGRQSLSDMQRRHMPRGGNMQGARGGDARDWQQQGNIPEHVCPKCNEILPDL
DSLQIHIMDCII
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagctcccccatggtgaacggggacgtctcccgtggtccgagctcccacccc
ggccacagccccaccacaggcaccctggaggaaacgctgcagcagatgaaccgcctcatc
caggagaaccgagacctgaaggaggcactgaagcagaccaacatgtcgatgaaggagcgc
ttcgagggtttgtctgtgtggagggagaagcagagggaggagaaggagttcctggaggag
aggcttgatgaggcccgtggccgtgtggaggccctctcctcgcacaaccaggagcttagc
atgaaggtggaggagctggagggcgaagggaagggacaggccgagacaaccaatcagaat
gcagaactggaggcgctgcatgcccagctggtgcgtctgcaggcagagaagagtgacctg
gtggccatgaactctgaactccagctcaagacaggtcaggggtcagaggacgactccttc
atagagatcaggattgctagggatgatactggaaaggacctgtatcataatgaaagggac
cccaggtatgacatgagtgtatccaggcaggagtctgaggagctgactgtcagccagctg
ctccagtccctgaggaaggagactcagagggtagagagactacaaatcgagctccaggct
accagatccagaatcacagagctggaggagaaagaaattaacacagagagctccacacag
acctcactactgccagaggtggtttccccagcactagccaacacagcatgtggtactgag
ccagaaccagaggaggagccccaacagaactctgggaaggataaggctgcgtcagaggtg
gaggatctgaaggatcagatgatgaccctgtttaatgagctacagcaggctcagagcaaa
ctggatgaggcagagggcttgaagatgaacctgcaggacagatgtagggatgtggagcgt
gacgtggtgactctgaaagcccagctggtagagaagcaggaggtacagagtgagaatgac
agactgaagctgcaggtggacagtatgaaggcccagaaccagctagagcagaggaaggct
ggagaggagaggactaacctgacccagctgaaggatgcctacaccaagctatttgaggac
tacaatgagttgaagcaagagagcaagaacagagagccactggtcactaaggaggtggga
gacctgcagaccagactggacgcagcagagaaggccctggctgctaagcaacagcagata
gatgttatgaagcaggagatctttcagaaggagaaggaactggagaccatctctgtgttc
caggctcaggcggaggtgtactcctctgacttctacgcggagcgagcagctcgggagaag
attcacgaggagaaggaacgtctgtttgctcagctggagtttgtcaagaaacagaacact
cagctacaggacgagatagattcactgggcaggcaatctctgagcgatatgcagagaaga
cacatgccacgtggaggcaacatgcagggagccagaggtggtgatgccagggactggcag
cagcaggggaatataccggagcacgtctgccctaagtgtaacgagatcctaccagacctg
gatagcctgcagattcacatcatggactgcatcatctga
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