Oncorhynchus kisutch (coho salmon): 109910368
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Entry
109910368 CDS
T09179
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
oki04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109910368
04082 Neuroactive ligand signaling
109910368
04519 Cadherin signaling
109910368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109910368
Ion channels [BR:
oki04040
]
Ligand-gated channels
GABA-A
109910368
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
109910368
NCBI-ProteinID:
XP_020365146
Ensembl:
ENSOKIG00005034571
LinkDB
All DBs
Position
LG19:40113334..40172236
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AA seq
455 aa
AA seq
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MRNRGHIFQCLLICLTLTLLLQTRPVIADPTTDAFKNNITLFTRILDRLLDGYDNRLRPG
LGDRITEVNTNVYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFDGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTMSEVTYVWTSKAADSVVVEGESSRLNQYDLLGQTVGQETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKSIVNDKKKEKAST
MKKNNAYAVAVANYAPNITKDSGLSTIAKGGAVDPNMAVGKVGGKTDPKKTFNSVSKIDR
ISRIMFPVLFSSFNLVYWATYLNREPYIKDMVPST
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatagaggccacatttttcaatgtctactcatctgcctcacactgacgctcctc
ttgcaaacgaggccagtgattgctgatcctacaacagatgccttcaagaacaatatcact
ctcttcacacggatccttgacagacttctagatggctatgataatcgtcttcgacccggc
cttggggatcgtataacagaggtgaataccaatgtctacgtcaccagctttggcccagtt
tcagatacagacatggaatacaccatagacgtgttcttccggcaaagctggaaagacgag
aggttaaaattcgacgggcccatgaacatactgcggctgaacaacttgatggccagtaaa
atatggacgccagacacgttcttccacaatgggaagaagtcagtggctcacaacatgacc
atgcccaataaactactgaggattcaagacgatggcaccctgctttacaccatgaggttg
acggttcacgcagagtgtcccatgcatctggaggacttccccatggacttccactcatgt
cccctgaagtttggcagctatgcctatacaatgtcagaggtgacttacgtctggactagt
aaggctgccgactctgtggtggtggaaggagagagttcccgtttgaaccagtacgacctt
ctcggccaaacagtgggccaagaaaccatcaagtccagcacaggcgaatacactgtcatg
acggcacatttccatttgaagcggaagattggatactttgtgatccagacctatctacca
tgcattatgaccgttatcctctcccaagtgtccttctggctgaacagagagtccgtgcca
gctaggactgtgtttggtgtaaccactgtcctgacaatgaccaccctgagtataagtgct
cgtaactccctccccaaggtggcctacgccacggccatggactggttcatcgctgtctgc
tacgcctttgtcttctctgccctcatcgagtttgccaccgtcaactacttcacaaagcgc
agctgggcctgggatgggaagagcattgtgaatgacaagaaaaaagagaaggcgtccacc
atgaagaagaacaacgcgtatgccgtggcggtggccaactatgcgcccaacatcaccaag
gactctgggttgtccaccatcgccaagggcggcgccgttgaccccaacatggcggttggc
aaggtgggtggcaaaacggacccaaagaagactttcaacagtgtgagcaaaatcgatagg
atttcaaggattatgttccctgtcctgtttagcagcttcaatttagtctactgggccacg
tacctaaacagagaaccgtatataaaggatatggtgccctcaacctag
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