Oncorhynchus kisutch (coho salmon): 116352816
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Entry
116352816 CDS
T09179
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116352816
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
116352816
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
116352816
03036 Chromosome and associated proteins [BR:
oki03036
]
116352816
Peptidases and inhibitors [BR:
oki01002
]
Metallo peptidases
Family M1
116352816
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116352816
Coactivators
SAGA/TFTC/STAGA complex
116352816
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116352816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
IL2
SR-25
Motif
Other DBs
NCBI-GeneID:
116352816
NCBI-ProteinID:
XP_031667768
Ensembl:
ENSOKIG00005048929
UniProt:
A0A8C7L842
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MHEVKMNRKKDKGFESPRPFKLTHQVVCINNINFQRKSVIGFVELTIFPTVVNLNRIKLN
SKQCRIYRVRVNDLEAPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVSAVDPDAGHGEL
VIKVPSELWKQGDEMNVLKVYIEFSLDQPKGGLHFVVPDVEGSMAERGAHVFSFGYQNST
RFWFPCVDSYSELCTWKLEFTVDASMVAVSCGDLVETVYTHDMRKKTFHYVLPIPTAASN
ISLSVGPFEILVDPYMHEVTHFCLPQLLPLLKHSMSYLHEIFEFYEEILTCRYPYSCFKT
VFVDEAYVQVSSYASMSIFSTNLLHSAMIIDQTPLTRQCLAQALAQQFFGCFISRMSWAD
EWVLKGISGYIYGLYLKKTFGVNQYRHWIKEELDKMVEYELKMGGVLLHPTFGGGKDKDN
PTPHLHFSIKHPHTLSWKYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQ
KYQSHMWSQMLVSTHSFLKSISNVSGKDIGPLIKQWVDQSAVVKFFGSFAFNRKRNVLEL
EIRQDYTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPL
MNGEEVDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQEESI
LALEKFPTPASRLALTDILEQDQCFYKVRQGACFCLAKIANSMMSTWTGPPAMKSLFTRM
FCCKSCPNIVKTNTFISFQSYFLQKTMPVAMAQLRDIQNLCPKDVLNFILDLIKYNDNRK
NKFSDNYYRAELIDALTNSLTPAISISNEVRTVDNLNGDVRLILEEITRSLNMEKLLPSY
RNTITVSCLRAIRMLQKNGHIPSDPSLFKSYAEYGHFVDVRVAALEAVVDYTRVDRSSVE
LQWLLNMVQNDPAHYIRHKILSMLGKNPPFTKAAESPLCNEALVDQLWKLMNSGTSHDWR
LRCDAVNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPEQGPDTTEMTGITMG
VHIPVMGFTSSLDEGLITMETVSSVSMSSGVAPPPQGLKRKLDSVVGPLGSSSPEPGQVL
QEEDTSKKFKIRFNTVEEDEIDMESPHDSQAFIHHHLNILERPSTPGKEPPAVDQAVLSL
PVTPLPSSFGKESTSSSKHSGDHHHHHHHHEHKKKKKKKHKHKHKHKHESKDKERDSHAF
SNSPASGRSVRSPSMSD
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagtcaagatgaacaggaagaaggacaagggatttgagagcccgcggcctttt
aaattgactcaccaggttgtctgcatcaacaacatcaactttcaaagaaagtctgtgatt
ggctttgtggagctgaccatcttcccaactgtggtcaacctgaaccggatcaaactcaac
agcaagcagtgcaggatctacagggtccgagtcaacgacctagaagcaccattcatttac
aatgaccctactctagaggtctgccaccacgagtccaagcagaggaacctgaactatttc
tccagtgcctacacagcagcagtcagtgctgtggacccagatgcaggacacggcgagctg
gtcatcaaagtcccctcggagctgtggaagcaaggagacgagatgaatgtgctgaaggtg
tacatagagttctctctggaccagcctaaaggaggccttcactttgtggtgcccgacgta
gaggggagcatggctgagagaggagcacacgtcttctccttcggataccagaactccaca
aggttctggttcccctgtgtggactcatactcagagctgtgcacctggaagctggagttc
acagtggatgcctctatggtagctgtgtcctgtggggacttggtagagactgtctatacc
catgacatgaggaagaagaccttccactacgtcctccccatccccaccgccgcctccaac
atctcactgtctgtcgggccctttgagatcctggtcgacccctacatgcatgaggtcacc
cacttctgtttaccccagctcctgcccctgttgaaacactccatgtcctacctgcatgag
atctttgagttctacgaggagatcctgacctgtcgatatccttactcctgcttcaagact
gtgtttgtggacgaggcctacgtccaggtgtcttcctacgcgtcgatgagcatcttcagt
actaatctgctccacagtgccatgatcatagaccagacccccctgaccagacagtgttta
gctcaggccctggcccagcagttctttggctgcttcatctccaggatgtcctgggctgat
gagtgggtgctgaaggggatctctggctacatctatggtctgtacctgaagaagaccttt
ggcgtgaaccagtaccgccattggatcaaagaggaactggacaagatggtggagtacgag
ctgaagatgggaggagttctcttacacccgaccttcggtggaggcaaagacaaggacaac
cctacccctcacctccacttctccatcaagcaccctcacaccctgtcctggaagtactat
aagatgttccagtgtaaagcccacctggtcatgaggctcattgagaacaggatcagcatg
gagttcatgctgcaggtgttcaacaagttactaagcctggccagtacagcgtcctcgcag
aagtaccagtcacacatgtggagtcagatgctggtatccacccacagcttcctcaagtcc
atctccaacgtgtcggggaaggacataggacccctcatcaagcagtgggtagaccagagt
gcggtggtgaagttctttggcagttttgccttcaacaggaaacggaacgttctagaactg
gagattcggcaggactacacctcctctggaacacagaaatatgtgggacccatcaaggtg
acagtccaggagctggatgggtccttcaaccacacgctgcagatcgaagagaacagcctg
aagcacgacatcccctgccactccaagagcagacgaaacaagaagaagaagattcctttg
atgaacggagaggaggttgacatggacctgtctgctatggatgcggattctcccttgctg
tggatccggatcgatccggacatgtccatcctgcgtaaggtggagtttgagcaggcagac
ttcatgtggcagtaccagctcaggtacgagcgtgacgtcgtggcccaggaggagtctatt
ttagccctggagaagttccccacgccggcctcccgtctggccctcactgacatcctagaa
caggaccagtgtttctacaaggtccgccagggcgcctgcttctgcctcgccaagatcgcc
aactccatgatgagcacctggaccggtcctccagccatgaagtctctgttcaccagaatg
ttctgctgtaagagctgtccaaacatcgtcaagaccaacaccttcatcagcttccagagc
tacttcctacagaagaccatgcctgtagccatggctcagctcagagacatccagaacctc
tgtcccaaagacgtcctcaacttcatcctggacctcatcaagtacaacgacaacaggaag
aacaagttctccgacaactactaccgtgccgagctgattgatgccctcaccaactccctg
accccggccatcagcatcagtaacgaggtgcgcaccgtggacaacctcaacggagatgta
cgtctcatcctggaggagatcacacggtctcttaacatggagaaactactgcccagctac
cgcaacaccatcactgtcagttgtctcagagctatccggatgctccagaagaatggtcat
attcccagtgatccctctctgtttaaatcctatgcagaatatggacactttgtggatgtt
cgtgtcgcagcgctggaagctgtggtggactacacaagagttgacaggagctccgtggaa
ctgcagtggctgctcaacatggtccagaatgacccggctcactacatcagacacaagatc
ctaagcatgctgggtaaaaaccctcccttcaccaaagcagccgagtctccactctgcaac
gaggctctggtcgaccagctgtggaaactcatgaactcaggtacgtctcatgactggcgg
ttgcggtgtgacgcggtgaatctgtactacactctgtttggtctgacgcgtccctcctgc
ctgcccctgcccgagctgggcctggtactcaacctcaaggagaagaaggccgtgctcaac
cccactatcaagcctgaacagggaccagacaccacagagatgactggcatcaccatgggc
gttcatatccctgtcatgggcttcactagcagtctggatgagggcctgatcaccatggag
acagtgtccagcgtgtctatgtccagtggtgtggccccaccccctcagggtctgaagagg
aagttggacagtgtcgttggcccgctgggctcgtcctcaccggagccaggccaggtcctg
caggaagaggacaccagtaaaaaattcaagatcagattcaacaccgtagaggaagatgag
attgacatggagagtccccatgacagccaggcattcatccaccaccacctcaacatcctg
gagaggccatccacaccaggtaaggaacctccagccgtggaccaggccgtcctctccctg
cctgtcacccctttaccttcttccttcggcaaagagtccacctcttcctccaaacacagc
ggtgaccaccaccatcaccaccaccaccacgagcacaagaagaagaagaagaagaagcac
aaacataaacacaaacacaaacatgagagtaaagacaaggagagggactcccatgccttc
agtaacagccctgctagtggacgctctgtgaggtctccatccatgtctgactag
DBGET
integrated database retrieval system
