Oncorhynchus kisutch (coho salmon): 116352971
Help
Entry
116352971 CDS
T09179
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
116352971
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
116352971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
116352971
NCBI-ProteinID:
XP_031659162
LinkDB
All DBs
Position
LG23:22216887..22223879
Genome browser
AA seq
1637 aa
AA seq
DB search
MSYHPVDTIGSPFRRSMNSRTNYGRSTGSPSSGFRSQSWSRASPGSTMTSSYKRSVNMPV
ARAYSSTLLSSADSVDFNQTNGDYKRSNEKEQLQGLNDRFAGYIDKVHYLEQQNSQIEEE
IQTLRQKQVSQSQLGDLYDQELQELRSMLEQIHHDKAQIQLDTDHVEDDIQRIRDRFDEE
ARIRDETEGIIRALKKGMTDSDLVKSELEKKVQSLHDEIAFIRNNHEEEVSDLFAQVQAS
QVTMERKDIQKTDITEALREIRTQLEGHSNQNLQQVEDWFMCRYSKLTDAAAQNKDAIKS
ARDEIADYRRQLQSKTVELESVRGTRESLERQLNDIEDRHNNDLSSLQETIHQLDNELKG
TKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRHTVTSSKKSKYEPP
KLKVQHKFVEEIIEEIRVEDEKDEMDQALAEMAQEFSATLEAEATDEGEDEGEEGGEEAE
GEGGEGESEEVVASTEAQVSSSTPAEEEEEDKEGEEEGGEKEEEGEKGEEGEGEKGDDTE
GGDEGEGEGELEETVLCSKAPESKASPDKEKAGEKEGSGGEEETGEGEGEEEGDDQDEDA
GSDKGSKDGDDKDEEDEKKGKDEKEDNIDEKAAVAKTEAPKTEAPKSEAPKVEVQKSEAP
KPSKPDSLKAESPKAGSPKSESPKAGSPKHESPKAVTPKSESPKPGSPKSESPKPAGSPK
SESPKHAGSPKSESPKLAGSPNSESPKPAGSPTSESPKPAGSPKSAGSPKSESPKPAGSP
KSESPKPAGSPKSESPKPAGSPKSESPKPAGSPKSESPKLAGSPKSESPKPAGSPTSESP
KSAGSPKSESPKPAGSPTSESPKPAGSPKSESPKLAGSPTSESPKPAGSPKSLSPKPSGS
PKSGSPKPSGSPKSESPKPAGSPKSESPKLAGSPKSESPKPAGSPTSESPKSAGSPKSES
PKPAGSPTSESPKPAGSPKSESPKLAGSPKSESPKPAGSPTSECPKSAGSPKSAGSPKSE
SPKSGSPKSESPKPAGSPKLESPKPAGSPKSESPKPSGSPKSESPKHAGSPKSESPKLAG
SPNSESPKPAGSPTSESPKPAGSPKSAGSPKSESPKPAGSPKSESPKPAGSPKSESPKPA
GSPKSESPKLAGSPKSESPKLAGSPKSESPKPAGSPTSESPKSAGSPKSESPKPAGSPTS
ESPKPAGSPKSESPKLAGSPTSESPKPAGSPKSLSPKPSGSPKSGSPKPSGSPKSESPKP
AGSPKSESPKLAGSPKSESPKPAGSPTSESPKSAGSPKSESPKPAGSPTSESPKPAGSPK
SESPKLAGSPKSESPKPAGSPTSECPKPAGSPKSAGSPKSESPKLAGSPTSESPKPAGSP
KSLSPKPSGSPKSGSPKPAGSPTSESPKSAGSPKSESPKPAGSPKSESPKLAGSPKSESP
KPAGSPTSESPKHAGSPKSESPKPAGSPKLESPKLGSPEAESPKGEAPKPEAPMSEAPKA
AEEKVDKKTDSEEERKVEKKDAAMNGDVEKITPEDKDKKDEGGKEAEEKDVISNGVDESP
TKDDPDQKDDPKDQKVVITKTVETITTGEDGAKHVTKSVTVTETVKESEDVMQEKIVSSK
KMEKHSSQSVKVVTETE
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccacccggtggacacgatagggagtccattcaggagaagtatgaatagtagg
accaactacggccgctccactggctccccctccagcgggttccgttctcagtcctggtcc
cgggcaagcccaggctccacgatgacctcctcctacaagaggagcgtcaatatgccggtt
gccagagcgtacagctccacactcctcagctccgccgacagcgttgatttcaatcaaacg
aacggagactacaagcgctccaacgagaaagagcagctccaggggctcaacgaccgcttc
gccggttacatcgacaaggtgcactacctggagcagcagaacagccagatcgaagaggag
atccagacgctgcggcagaagcaggtgtcgcaatcccagctaggcgatttatacgaccag
gaactccaggagctgcgctccatgctggagcagattcaccacgataaagcgcagatccag
ctcgacacggaccacgtcgaggatgacatccagagaattagggaccgtttcgatgaggaa
gcccgcatcagggatgagacggaaggtatcatccgggcgttgaaaaaaggtatgaccgac
tctgatttggtgaagtcagagttggagaagaaagttcagtcactgcatgacgagattgcc
tttatccgcaacaaccacgaagaagaggtgagcgacctgtttgcccaggtgcaggcgtcg
caggtgaccatggagaggaaagacatccagaagacggacatcaccgaggcgctccgggag
atccgcacccagctcgagggccactccaaccagaacctgcagcaggtggaggactggttc
atgtgccgctattccaagctcactgatgctgcggcacaaaacaaagatgcaatcaagtcc
gcccgtgatgagatagcagactaccgtcgccagcttcagtccaagaccgtggagttagag
tccgtccgtggaaccagggagtcactggagaggcagttgaatgacatcgaggaccgacac
aacaacgacctgtccagcctgcaggagaccatccaccagctggataatgagctcaagggc
acgaagtgggagatggcgcgtcatctgcgtgagtaccaggacctgctcaatgtgaagatg
gccctcgacattgagattgctgcatacaggaaactcctagaaggtgaagagacccacttt
agcactttcccctaccgccacaccgtcacctcctctaagaagtccaagtatgagcctccc
aaattgaaagtccagcataagtttgtagaggagatcatcgaggagatcagggtagaggat
gagaaggatgagatggaccaggccctggctgagatggcccaggagttttctgccactctg
gaggcagaggcaacagatgaaggagaggatgagggagaagagggaggagaagaagcagag
ggagaagggggagagggtgaatcagaagaggttgtagcctccactgaagcccaagttagc
tcgagcacacctgctgaggaggaagaggaggacaaagaaggtgaagaggaagggggagaa
aaagaagaagagggtgagaaaggagaagagggtgagggtgagaagggagatgatacagaa
ggtggtgatgagggagaaggagagggggaattagaggagacagtcctgtgctctaaagcc
ccagaatcaaaggcctctcctgacaaagagaaggctggagagaaggagggaagcggagga
gaagaggagacaggagagggagagggagaagaggagggtgatgatcaagatgaagatgca
ggtagtgacaaaggatccaaagatggagatgataaggatgaggaagatgagaagaaagga
aaggatgagaaagaagacaacatagatgagaaggcagctgtagccaagacagaggctccc
aaaacagaagcccccaagagtgaggccccaaaagttgaggtccagaaatctgaggcccca
aagccctccaagccagactccctaaaagctgaatccccaaaggctgggtcccccaagtct
gagtcaccaaaagctggatcccccaaacatgaatctcctaaagctgtaacccccaaatct
gaatctccaaaacctggctcccccaaatctgaatccccaaaacctgctggatcccccaaa
tctgaatctccaaaacatgctggatcccctaaatctgaatccccaaaacttgctggatcc
cctaattctgaatccccaaagcctgctggatcccctacttctgaatccccaaaacctgct
ggatcccctaaatctgctggctcccccaaatctgaatccccaaaacctgctggatccccc
aaatctgaatccccaaaacctgctggatcccccaaatctgaatccccaaaacctgctgga
tcccccaaatctgaatccccaaaacctgctggatcccccaaatctgaatccccaaaactt
gctggatcccctaaatctgaatccccaaaacctgctggatcccctacttctgaatccccc
aaatctgctggatcccctaaatctgaatccccaaaacctgctggatcccctacttctgaa
tccccaaaacctgctggatcccctaaatctgaatccccaaaacttgctggatcccccaca
tctgaatcccccaaacctgctggatcccccaaatctttatcaccaaaaccttctggatcc
cccaaatctggatccccaaaaccttctggatcccccaaatctgaatccccaaaacctgct
ggatcccccaaatctgaatccccaaaacttgctggatcccctaaatctgaatccccaaaa
cctgctggatcccctacttctgaatcccccaaatctgctggatcccctaaatctgaatcc
ccaaaacctgctggatcccctacttctgaatccccaaaacctgctggatcccctaaatct
gaatccccaaaacttgctggatcccctaaatctgaatccccaaaacctgctggatccccc
acttctgaatgcccaaaatctgctggatcccctaaatctgctggatcccccaaatctgaa
tctccaaaatctggctcccccaaatctgaatccccaaaacctgctggatcccccaaattg
gaatccccaaaacctgctggatcccccaaatctgaatccccaaaaccttctggatcccct
aaatctgaatctccaaaacatgctggatcccctaaatctgaatccccaaaacttgctgga
tcccctaattctgaatccccaaagcctgctggatcccctacttctgaatccccaaaacct
gctggatcccctaaatctgctggctcccccaaatctgaatccccaaaacctgctggatcc
cccaaatctgaatccccaaaacctgctggatcccccaaatctgaatccccaaaacctgct
ggatcccccaaatctgaatccccaaaacttgctggatcccccaaatctgaatccccaaaa
cttgctggatcccctaaatctgaatccccaaaacctgctggatcccctacttctgaatcc
cccaaatctgctggatcccctaaatctgaatccccaaaacctgctggatcccctacttct
gaatccccaaaacctgctggatcccctaaatctgaatccccaaaacttgctggatccccc
acatctgaatcccccaaacctgctggatcccccaaatctttatcaccaaaaccttctgga
tcccccaaatctggatccccaaaaccttctggatcccccaaatctgaatccccaaaacct
gctggatcccccaaatctgaatccccaaaacttgctggatcccctaaatctgaatcccca
aaacctgctggatcccctacttctgaatcccccaaatctgctggatcccctaaatctgaa
tccccaaaacctgctggatcccctacttctgaatccccaaaacctgctggatcccctaaa
tctgaatccccaaaacttgctggatcccctaaatctgaatccccaaaacctgctggatcc
cccacttctgaatgcccaaaacctgctggatcccctaaatctgctggatcccccaaatct
gaatccccaaaacttgctggatcccccacatctgaatcccccaaacctgctggatccccc
aaatctttatcaccaaaaccttctggatcccccaaatctggatccccaaaacctgctgga
tcccctacttctgaatcccccaaatctgctggatcccctaaatctgaatccccaaaacct
gctggatccccaaaatctgaatccccaaaacttgctggatcccctaaatctgaatcccca
aaacctgctggatcccctacttctgaatccccaaaacatgctggatcgcctaaatctgaa
tccccaaaacctgctggctcccccaaattggaatcccccaaattaggatcccccgaggca
gagtcccctaagggtgaggccccaaaaccagaagctccaatgtcagaggcccccaaggct
gcagaagagaaagtagacaaaaagactgattcagaggaagagaggaaggtagaaaagaaa
gatgcagccatgaacggagatgtggagaagattaccccagaggacaaggacaagaaggat
gagggtgggaaagaggcagaggagaaggatgttatctcaaatggagtggacgagagcccc
actaaagatgacccggaccagaaagatgatccaaaggaccagaaggtggtcatcaccaaa
acggtggagaccatcaccactggagaggacggggccaagcatgtcaccaaatcggtcact
gtcaccgagactgtgaaggagtctgaggatgtgatgcaggagaagatagtctccagcaag
aagatggagaaacactcttcccagtccgtcaaggtggtgactgaaactgagtaa
DBGET
integrated database retrieval system
