KEGG   Oncorhynchus kisutch (coho salmon): 116353590
Entry
116353590         CDS       T09179                                 
Name
(RefSeq) protocadherin beta-16-like
  KO
K16494  protocadherin beta
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oki04515]
    116353590
Cell adhesion molecules [BR:oki04515]
 Cadherins
  Protocadherins
   116353590
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 DUF4394 7TM_GPCR_Sri Peptidase_S55
Other DBs
NCBI-GeneID: 116353590
NCBI-ProteinID: XP_031645847
LinkDB
Position
LG15:complement(27818400..27821127)
AA seq 810 aa
MGNWRSTDRRGRWQVLFLFLCLSALDSVTGQARYSIPEEQSEGSIVGNIGRDLGLEVKRL
VSGKARIITKGARQYVDLNRDKGLLVVKERIDREELCGQTTPCSFSFELIIETPIQLYRV
TVEVRDINDNTPSFPKDEIHFKISESAVSGARFSLESAVDPDVGVNSIQNYSLRPPDNFK
LEVHSQADGGKYIEMVLQTPLDREEQETLSLMLIATDGGEPQRTGTVRIHITVLDANDNA
PVCGQPVYKTDVKESSPKGTLITTVSADDADQGVNGEVTFSIAHVAKEAKELFELDVDTG
EIKVVGNLDFEKSRNYQLNVQASDHGGFTDTCKVVIQIIDENDNVPTIQLMSHSNSIPED
SPPGTTVAVINVEDADSDGNGVVLCYINADIPFKIESSLTDYYTIVTDSTLDRETVSEYN
VTITVSDEGTPPLSSNMNITVKVSDVNDNAPKFDQPVYSKSIQENNSPGFSIFSVRASDA
DWGQNARVSYFLDDKQVNGVTASSVVSVNSENGAIHAVRSFDYEQIKSFQFNVTARDGGS
PPLSSVVAVRILVQDQNDNAPQVLYPVQTSSSLVAEMVPRSADVGYLVTKVVAVDVDSGQ
NAWLSYKLQKATDRALFEVGLQNGEIRTVRQVNDKDAVKQRLTVVVEDNGQPSRSATVNV
NVAVADSFPEVFSEFTDFTHDKDYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWRQ
SRVLYHSNLPVIPYYPPRYADTLGTGTLQHVYNYEVCRTTDSRKSDCKFVRPCSQNVLIM
DPSCTGTMQRMQSEQNILDEPDSPLEVSLL
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgggtaactggaggtcgactgaccgcagaggccggtggcaagtactgtttttatttctt
tgtctgagcgccctagattctgtaactgggcaggcacgatattccataccagaggagcag
tcagaggggtcgatcgttggaaacattggtagagatttgggtttggaggtgaagagacta
gtgtccggtaaagctcgcattataacaaaaggagcacgacagtatgtagatctgaaccga
gacaaagggctcctcgttgtgaaagagagaatcgaccgagaggagctctgcggacagact
acgccttgtagcttcagctttgagcttatcatagaaacccccattcagttatatcgagtt
acagtagaggttcgtgacattaacgataacacaccatcctttcccaaggatgaaatacat
ttcaaaatcagtgaatctgccgtgtccggggcgcgcttttctctggagagcgccgttgac
cctgacgttggtgttaacagtatacagaattattctctaagaccaccagataatttcaaa
ttagaggtacacagccaagccgatggtggtaaatacattgagatggttttgcaaaccccc
ctagacagagaggaacaggagactctgtctctgatgcttattgctactgacggaggcgag
cctcagaggactggaactgtccgcatccatattaccgtgctggatgccaatgataatgcg
ccagtatgtggtcaacccgtttataaaacagacgttaaggagagctccccaaaagggact
ttgataaccaccgttagcgcagacgatgcagaccaaggggtgaatggagaggtcactttc
tccatcgctcatgttgctaaagaggcgaaggagctgtttgagctcgacgtggatactgga
gagattaaggtggtaggaaacctggattttgaaaaatcaagaaattatcagttaaatgtt
caggcgagcgaccacggagggtttacggatacgtgtaaagttgtcattcaaattattgat
gagaacgataatgtccccacaatacaactcatgtcacattctaactcgattcccgaggac
tctccccctggtaccactgtagctgttattaatgttgaggacgcagactcagacggcaac
ggtgtcgttctttgctatattaacgcagatattccgttcaaaatagagtcatcgttaacc
gattattatacaatagtcactgatagcacattggatagagaaaccgtgtctgagtataac
gtcaccattacagtttcagatgaagggactccgcctctctccagcaatatgaacataact
gttaaagtatcagatgtgaatgataacgcccccaagtttgatcaacctgtatatagtaag
tctattcaggaaaacaattcgccagggttttctatattctcagtgagagcaagtgatgct
gactggggtcaaaatgcccgcgtctcctactttctcgatgataaacaagttaacggggtg
actgcttcctctgttgtctcagtaaattcagaaaatggcgccatccatgctgttaggtca
ttcgattatgaacaaatcaagtcgtttcaattcaacgtcactgcccgtgatggagggtct
ccacctctcagttcagtggtcgctgttagaatattagtccaggaccagaatgacaacgcg
cctcaggttctgtatccagtccagactagcagctctctggtggctgaaatggtgcctcgt
tcagcagatgtgggctatcttgtcactaaagtggtggctgttgatgtggactctggacag
aatgcctggctctcgtataaactgcagaaagcgacagacagggcgctgtttgaagtgggt
ttacagaatggagaaataagaactgtacgtcaagtcaatgataaagatgctgtgaaacaa
aggctcactgttgtagtggaggacaacgggcagccctctcgttcagctacagtcaatgtt
aacgtggcggtggcggacagcttccctgaagtgttctcggagttcactgactttacgcac
gacaaggactacaatgacaacctgactttttacttagtcttggctttggctgtagtctca
tttctgttcatcacatgtttagtggttattatatcagtgaaaatatacagatggagacag
tctcgcgtcctctatcattccaatctcccggttattccgtattatccaccgcgttacgca
gacactttggggacaggaactctacagcacgtgtacaattacgaggtgtgcaggacgact
gactccagaaagagtgactgtaagttcgtcagaccctgtagtcagaacgtactgataatg
gaccccagttgtacagggacgatgcagcggatgcagagtgaacagaacatcctggatgaa
ccagactctccactagaggtgagtttgttgtag

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