Oncorhynchus kisutch (coho salmon): 116353590
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Entry
116353590 CDS
T09179
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
116353590
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
116353590
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
DUF4394
7TM_GPCR_Sri
Peptidase_S55
Motif
Other DBs
NCBI-GeneID:
116353590
NCBI-ProteinID:
XP_031645847
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Position
LG15:complement(27818400..27821127)
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AA seq
810 aa
AA seq
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MGNWRSTDRRGRWQVLFLFLCLSALDSVTGQARYSIPEEQSEGSIVGNIGRDLGLEVKRL
VSGKARIITKGARQYVDLNRDKGLLVVKERIDREELCGQTTPCSFSFELIIETPIQLYRV
TVEVRDINDNTPSFPKDEIHFKISESAVSGARFSLESAVDPDVGVNSIQNYSLRPPDNFK
LEVHSQADGGKYIEMVLQTPLDREEQETLSLMLIATDGGEPQRTGTVRIHITVLDANDNA
PVCGQPVYKTDVKESSPKGTLITTVSADDADQGVNGEVTFSIAHVAKEAKELFELDVDTG
EIKVVGNLDFEKSRNYQLNVQASDHGGFTDTCKVVIQIIDENDNVPTIQLMSHSNSIPED
SPPGTTVAVINVEDADSDGNGVVLCYINADIPFKIESSLTDYYTIVTDSTLDRETVSEYN
VTITVSDEGTPPLSSNMNITVKVSDVNDNAPKFDQPVYSKSIQENNSPGFSIFSVRASDA
DWGQNARVSYFLDDKQVNGVTASSVVSVNSENGAIHAVRSFDYEQIKSFQFNVTARDGGS
PPLSSVVAVRILVQDQNDNAPQVLYPVQTSSSLVAEMVPRSADVGYLVTKVVAVDVDSGQ
NAWLSYKLQKATDRALFEVGLQNGEIRTVRQVNDKDAVKQRLTVVVEDNGQPSRSATVNV
NVAVADSFPEVFSEFTDFTHDKDYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWRQ
SRVLYHSNLPVIPYYPPRYADTLGTGTLQHVYNYEVCRTTDSRKSDCKFVRPCSQNVLIM
DPSCTGTMQRMQSEQNILDEPDSPLEVSLL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgggtaactggaggtcgactgaccgcagaggccggtggcaagtactgtttttatttctt
tgtctgagcgccctagattctgtaactgggcaggcacgatattccataccagaggagcag
tcagaggggtcgatcgttggaaacattggtagagatttgggtttggaggtgaagagacta
gtgtccggtaaagctcgcattataacaaaaggagcacgacagtatgtagatctgaaccga
gacaaagggctcctcgttgtgaaagagagaatcgaccgagaggagctctgcggacagact
acgccttgtagcttcagctttgagcttatcatagaaacccccattcagttatatcgagtt
acagtagaggttcgtgacattaacgataacacaccatcctttcccaaggatgaaatacat
ttcaaaatcagtgaatctgccgtgtccggggcgcgcttttctctggagagcgccgttgac
cctgacgttggtgttaacagtatacagaattattctctaagaccaccagataatttcaaa
ttagaggtacacagccaagccgatggtggtaaatacattgagatggttttgcaaaccccc
ctagacagagaggaacaggagactctgtctctgatgcttattgctactgacggaggcgag
cctcagaggactggaactgtccgcatccatattaccgtgctggatgccaatgataatgcg
ccagtatgtggtcaacccgtttataaaacagacgttaaggagagctccccaaaagggact
ttgataaccaccgttagcgcagacgatgcagaccaaggggtgaatggagaggtcactttc
tccatcgctcatgttgctaaagaggcgaaggagctgtttgagctcgacgtggatactgga
gagattaaggtggtaggaaacctggattttgaaaaatcaagaaattatcagttaaatgtt
caggcgagcgaccacggagggtttacggatacgtgtaaagttgtcattcaaattattgat
gagaacgataatgtccccacaatacaactcatgtcacattctaactcgattcccgaggac
tctccccctggtaccactgtagctgttattaatgttgaggacgcagactcagacggcaac
ggtgtcgttctttgctatattaacgcagatattccgttcaaaatagagtcatcgttaacc
gattattatacaatagtcactgatagcacattggatagagaaaccgtgtctgagtataac
gtcaccattacagtttcagatgaagggactccgcctctctccagcaatatgaacataact
gttaaagtatcagatgtgaatgataacgcccccaagtttgatcaacctgtatatagtaag
tctattcaggaaaacaattcgccagggttttctatattctcagtgagagcaagtgatgct
gactggggtcaaaatgcccgcgtctcctactttctcgatgataaacaagttaacggggtg
actgcttcctctgttgtctcagtaaattcagaaaatggcgccatccatgctgttaggtca
ttcgattatgaacaaatcaagtcgtttcaattcaacgtcactgcccgtgatggagggtct
ccacctctcagttcagtggtcgctgttagaatattagtccaggaccagaatgacaacgcg
cctcaggttctgtatccagtccagactagcagctctctggtggctgaaatggtgcctcgt
tcagcagatgtgggctatcttgtcactaaagtggtggctgttgatgtggactctggacag
aatgcctggctctcgtataaactgcagaaagcgacagacagggcgctgtttgaagtgggt
ttacagaatggagaaataagaactgtacgtcaagtcaatgataaagatgctgtgaaacaa
aggctcactgttgtagtggaggacaacgggcagccctctcgttcagctacagtcaatgtt
aacgtggcggtggcggacagcttccctgaagtgttctcggagttcactgactttacgcac
gacaaggactacaatgacaacctgactttttacttagtcttggctttggctgtagtctca
tttctgttcatcacatgtttagtggttattatatcagtgaaaatatacagatggagacag
tctcgcgtcctctatcattccaatctcccggttattccgtattatccaccgcgttacgca
gacactttggggacaggaactctacagcacgtgtacaattacgaggtgtgcaggacgact
gactccagaaagagtgactgtaagttcgtcagaccctgtagtcagaacgtactgataatg
gaccccagttgtacagggacgatgcagcggatgcagagtgaacagaacatcctggatgaa
ccagactctccactagaggtgagtttgttgtag
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