Oncorhynchus kisutch (coho salmon): 116354001
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Entry
116354001 CDS
T09179
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oki04054
]
116354001
Pattern recognition receptors [BR:
oki04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
116354001
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_9
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
116354001
NCBI-ProteinID:
XP_031648397
Ensembl:
ENSOKIG00005013465
UniProt:
A0A8C7FPR1
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All DBs
Position
LG16:complement(45328325..45332285)
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AA seq
969 aa
AA seq
DB search
MTLKITMPGKQRGSTFSQLRLFLSFLMYCWVLADPVCGYFLKNCTIRGNLSDPSNMKVLC
EKRNLEVIPKDIPRKVSVLDVAMNNISKIGKLDFKGLSNLKILNMSRNQISQLDNGSLRH
LEALQELGLAHNRLTTLSDHLFQGLVNLSLLHLDNNLITTIASSSFQLLSSLKTVNLTKN
NLYNMKEVQPIVQLPHLQELYIGSNKYTSFQSQEISNTSIELRLLDLSRNPLGIFRITAD
VLPYLEVLDIAYCGKLGHMEWDVLNRSFLRNVKRLNLSGIEMSLERMGMVLQTVNSSLVH
LRLYDISEERVKALTDIACHIPTLSLLRLHHNNISVLSKEFLQSCKQLTEMDVCDNNINQ
LSELLFRSMEQLSTLKLGHNRLSSVPKATRNISTLMLLDLSFNIINKLGCSDFSNLTGLT
QLFLFHNQISNLPGCVFQDLKDLRILKLGSNKILALNDDFMSGLHKLEYLSMSYNKLSSI
SKGDFKGLASLKTLLLFDNQIASLEDGAFEGLVNLTELRLQSNKITQIDIRNTVLTGLPH
LRTLDISCNYITYVNDGKLDPPPFSHLTSLENLQIHSQRHKGLCHLPINFLEGLKSLLAF
KAGNLNIKDLHPNTFIHTPRLWYLDVSKNEFTALTPKLFRPTPRLNRMYLSKARLQSLDF
LVGANLSRVTFLQVSKNDITVVNETVFRSLPALTYLDMQDNPFTCGCSDAWFVQWMESDN
QTQVVGAGEFTCNYPADLKDTKLLDVELQFCIVHLGLYYYISTTCLVLLTLIASFAYHFL
KWQVIYGYYLFLAFLYDTKQRNKLTPHGCQYDAFISYNAHDEPWVLRELLPELEGEQGWK
LCLHHRDFQPGKPIIDNIMDGIYGSRKTICVISHRYLESEWCSREIQVASFRLFDEQKDV
LILVFLEEIPTHQLSPYHRMRKLVKRRSYLSWPRAGEQTGVFWQQLRLALESKDGSAEEN
PILSGVEAL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaagataaccatgccaggaaaacaacgtgggtctacattctctcagctgaga
ctctttcttagtttcctgatgtattgttgggttcttgctgatccagtatgtgggtacttc
ctgaaaaactgcacaatccggggtaatctcagtgacccctctaacatgaaagtactctgt
gaaaaaaggaacctagaagtcataccaaaagacattccacggaaagtaagcgttttagat
gtggccatgaataacatttccaaaattggaaagttggattttaaaggcctatcaaacctc
aaaattctaaacatgtcaagaaaccagatctctcaattggacaatgggtctctcagacac
ctagaggctcttcaggagctgggtctggctcataacagactcacaaccctgtcagaccat
ttgtttcagggcctggtaaacctctccctgctacatctggacaacaacctcatcacaacc
atcgcgtcctcatcctttcaacttctctccagtttgaagacagtgaatttaaccaagaac
aacctttataatatgaaggaagttcagcccatcgtacaattaccacacttacaggagttg
tacattgggagcaacaaatacacctctttccagtcacaggaaatatcaaacacttctata
gagctgaggctgttggatttatcccggaatccattgggaatcttcaggatcacggcagat
gttcttccttaccttgaggtgttagacatcgcctactgtggcaaacttggacacatggaa
tgggatgtgctgaacaggtcttttctgagaaacgtcaaacgtctgaacctgagcgggata
gagatgtctttggagaggatgggtatggtgctgcagacggtcaactcctcattagtccat
ctgagactgtatgacattagtgaagagagggtcaaggctctcactgatattgcctgccat
atacccacacttagcttgctacgactgcatcataacaacataagtgttctctctaaggaa
tttctgcagtcatgtaaacagttgaccgaaatggacgtatgtgataataatatcaatcag
ctgtctgagcttttattcagatcaatggagcaattaagtactttgaaactgggccacaac
aggctttcttccgtaccaaaggccacaagaaatatatccacactaatgctcctggatctc
agcttcaatatcatcaataaactgggctgctcagatttctccaatcttacaggactcaca
caactctttcttttccacaatcaaatctccaaccttccaggatgtgttttccaggatttg
aaagacttaaggatccttaaactgggatcaaacaaaatcctggccttgaatgatgacttc
atgagtggtttgcacaaactagaatatttgtcaatgtcatacaataagctgagctcaatc
tctaaaggagactttaaaggcttagcatcactcaagaccctgcttttatttgacaatcag
attgctagtcttgaagatggagcctttgagggattggtgaatcttacagaacttagactc
cagtcaaataagatcactcaaatagacatcagaaacactgtgctcacgggacttccacac
ttaagaactcttgatatatcctgtaattacatcacatatgtaaatgatggtaaattagac
cctccacccttctctcacctgacatctctggagaacctgcagatccatagtcagcgtcac
aagggactgtgtcatctacctatcaacttccttgaaggtttgaaatctttattggcattc
aaggcagggaatctcaatattaaggacctgcacccaaacacatttattcacacaccacgg
ttgtggtaccttgatgtcagtaagaatgagttcacagccctcacgccaaagctgtttcgc
ccaaccccaaggctcaacagaatgtacctgtccaaagcacgtcttcagtccttagatttc
ctcgtaggagcaaacctcagtagagtcactttcttgcaggtgagcaagaacgacataaca
gtagtcaatgagacagtgttccgttctctccctgccttgacatacctggacatgcaagat
aatcctttcacctgtggctgcagtgatgcttggtttgtccagtggatggagagcgacaac
caaacacaagttgttggtgcaggagaatttacctgcaactatcctgccgatctaaaggac
accaagctgttggatgttgagcttcagttctgtatagtacacttaggactttactactac
atttctaccacttgtctggtcctcctcaccctgatagcatcctttgcctaccacttcctg
aaatggcaggtcatttacggctattacctcttcctggctttcctctatgacaccaagcaa
aggaataagctcacgcctcatggctgtcagtacgatgccttcatctcctacaacgcccac
gatgagccctgggtcctgagggagcttctgccagagctggagggagagcagggctggaag
ctgtgtctccaccaccgggacttccagccaggcaaacccatcatagacaacattatggac
ggcatctacggaagccgcaagaccatctgtgtcatcagccaccgctacctggagagtgag
tggtgctcccgggagatccaggtggccagcttccggctctttgatgagcagaaggacgtc
ctgattctggtgttcctggaggagatccctacccaccagctgtcaccctaccaccggatg
aggaagctagtgaagagacgctcatacctgagctggcccagagctggggagcaaaccggg
gtcttctggcagcaactacggttggctttagagagcaaggatggctctgctgaggaaaat
cccatcctctctggggtggaggctctgtga
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