Oncorhynchus kisutch (coho salmon): 116354955
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Entry
116354955 CDS
T09179
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oki04054
]
116354955
Pattern recognition receptors [BR:
oki04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
116354955
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
116354955
NCBI-ProteinID:
XP_031652982
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Position
LG19:11550450..11556456
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AA seq
941 aa
AA seq
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MSAMFSLFLLIQSVNGWMHPKCHVYNTGEYFPTWNYCPLAEQYTAACRDVTAIEEDLVGL
PSNINTLCISMKRGENSSMSLGFFARFQYLEYLYIGGCFPQILPAGNSQGLQNLQHMYIN
GLVTGCCDCHIGPNTFRDLVKLSNLTIFGYRLSAMAPDVFHYIPQLQSVYIHEPCVENLS
EILCRIVHIISLTKLNVHAPNIQSLNQSNCSMLKATESNLTSVNLDFGQINHIEEGALAC
LQNLTRFSGGLNQDVLLRLPLSGIKQIQVLYSYGRDSIVFESICNVVFLLSIKEIHFANV
NTSSLSMSSVELCIGLEYMGFDGPGAFHSSPHLKWNFISSLKNLKMLYVSGQTENSLDLC
SFRKQPITWLTELTFMSSNVQTLFAKRFSCLENLRSLDLSCSFISNIEDFAFFGLANLES
LDMTQNSITQLYANTFIGLHSLTLLDLRENPQIYNIEAMSFAHLTCLRQVFLGYLNYPPR
EPVIKLNLTLVFGDVLSHLTHLHISSGMRPMQLIIGSNITSKQNLSLQLKGQTVSFEDCD
RPFFQSVTHLHADAEEFLCGSEFMGKYFRSVETFVYRSKLSAKSVDLTSMNQLIHLRKLT
LVQVDLLIQRSADIIFHNLTKLEVLKLSNCRIDSLEGGLTKDFKSLKTLYLRIENVYQVI
YSFTEHLSSLKYLILDTLQMFCSCDNAWLIAWAKGYRPVEVIMLNHEVMYNLEDLICLSD
NGLDTPNFVKYTEANCTTEVGFVLFAATGLGVIFFMLVVLVHNLTGPYLLPLYYIILGWL
SEAMRSNTRGRYHYDAFVSYSGKDERWVVEELLPNLEKRGPPFLRLCLHSRDFQLGKDIV
ENITDSLYRSRRTLCLVSRHYLHSNWCSLEMKLATSRLQVEQRDILLLVFLEKIPPRRLS
AHHRLARLVKTRTYLDWPQDPHQHQAFWDRLWAKLKPPTEA
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaatgttttccctgttcctgttgattcagagtgttaatggatggatgcatcct
aaatgccacgtttataacactggggaatactttcccacctggaactactgtcctttggca
gaacagtacactgctgcctgtcgagatgtcacagccatcgaggaggatctggttggactt
ccctctaatatcaataccctctgcatatctatgaaacgtggggaaaatagttctatgtct
ctgggctttttcgctcgttttcagtatttggagtatctgtacattggaggctgttttcct
caaatccttccagctgggaatagccagggccttcaaaatctgcaacatatgtacattaat
ggattggtcactgggtgctgtgattgtcatattgggcctaacacattcagagatctagtt
aagctaagtaatttgaccatatttggttataggctatcagcaatggcaccagatgttttc
cattacatacctcaattacaaagtgtctatattcatgaaccctgtgtagagaatttgtca
gaaatactatgcagaatagttcatataatttcacttacaaagttaaatgtacatgcacca
aatatacaatctttaaaccaatcaaactgctccatgttaaaagctaccgaaagcaatcta
acaagcgtcaatttagatttcggtcaaataaaccatatagaggaaggtgcactggcctgt
ctccagaacctgacacgtttttctgggggcctaaaccaggatgtcctactgcgccttccc
ctgtctggcattaagcaaatccaggtcttgtattcctatggtagggatagcattgttttt
gaaagtatctgtaatgtagtgtttttgctttcaatcaaggaaatacattttgccaatgtc
aatacaagcagcctctccatgtccagtgttgaattgtgcattgggctggaatatatgggt
tttgatggacctggagccttccattcttctccccatttgaaatggaattttatttccagt
ctcaaaaaccttaaaatgttatatgtatctggccagacagaaaacagtcttgacctctgc
tcattccgaaaacaaccaatcacatggttaacagaactcactttcatgtcgagcaatgta
caaacgctttttgcaaaacggttcagctgtcttgagaacctgcggtctctagatttgtca
tgtagtttcatttcaaacattgaagactttgctttcttcggattggcaaatctggagtcc
ttagacatgacacaaaatagtataacccagttatatgcaaacacatttattggtttacat
agtttgacattgttagacctcagggaaaatccacagatctacaatattgaagcaatgtct
ttcgcacatcttacatgtctaagacaagtgtttctggggtacttgaactatccaccaaga
gaacccgtgataaagctgaatctgacacttgtattcggtgatgttctgagtcacctgact
catctgcacattagttcaggaatgaggccaatgcagttgattattggcagtaacatcaca
tctaaacagaacctgagtctccaactcaaaggccagacagtgtcatttgaagactgtgac
agacccttctttcagtctgtaacccatcttcatgctgatgctgaagaattcctttgtgga
tctgaattcatgggaaagtacttcaggtctgtggagacatttgtgtacagatcaaagctt
tcagctaaaagtgtggacttaacatcaatgaatcagctcattcacctgaggaaactgact
ctagtacaggtggatcttttaatacagcgttctgccgacatcatttttcacaacctgacc
aaactggaggttctgaaactttcaaactgcaggattgactctttggaggggggtttaact
aaagactttaaatccttgaaaaccttatatttgcgtatcgagaacgtttatcaggtaatc
tacagctttactgaacatctctctagcctaaagtatttgatacttgatacattacagatg
ttttgcagttgtgacaatgcttggctcattgcatgggcaaaggggtacaggccggttgaa
gtgatcatgcttaatcatgaagttatgtataatttagaggacttgatatgcttgtcagac
aatggactagacacacctaactttgtcaagtacacagaagccaactgcacaacagaggtg
ggctttgtgctctttgctgcgactggcctgggagtcatcttcttcatgctcgtggtgctg
gtccataatctgaccggtccttacctcctcccgctctactacatcatccttggctggctg
tcggaggcgatgcgatcaaacaccagggggcgctaccactacgatgcgtttgtctcctac
agtgggaaggatgagcgctgggtggtggaggagctactacccaacctggagaagaggggt
ccccctttcctacgcctctgtctgcacagcagggacttccagctggggaaggacattgtg
gagaacatcacagacagcctctaccggagccgtcgcacactctgcctggtcagtcgccac
tacctgcacagtaactggtgctccctggagatgaagctggccacctccagactgcaggtg
gaacaaagggacatcctcctcctggtcttcctggagaagatcccccctcgcaggctgtct
gcccaccacaggctggctcgcctggtgaagaccagaacctatctggactggccccaggac
ccccatcagcaccaggcattctgggacagactgtgggctaaactgaaacctccaactgaa
gcctga
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