Oncorhynchus kisutch (coho salmon): 116358974
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Entry
116358974 CDS
T09179
Name
(RefSeq) DNA-binding protein RFX7-like isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
116358974
Transcription factors [BR:
oki03000
]
Eukaryotic type
Other basic domains
RF-X
116358974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
116358974
NCBI-ProteinID:
XP_031667370
Ensembl:
ENSOKIG00005050719
LinkDB
All DBs
Position
LG3:66889055..66932038
Genome browser
AA seq
1451 aa
AA seq
DB search
MTEDQQQHDQLPKLGSGISTLPSLVPGLQGTEANALQLKIKNSICKSVQSKVDNILKDVE
TFTDIEKLYLYLKLPSGPSNSEKRTERGSASPGELSCSDQSSMSSSRTQQMHAFNWIRNH
LEEHPETSLPKQEVYDEYKSYCDNLCYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYC
YSGLRKKAFVHMPSLPNLELHKTGDGCEVLEASGQLCSAEEEVRSAACGLVCEWAQKVLS
RQFDAVEDLARFLLNSHYIGTKSVAALTVMTGTPTGVKTPLPSSAFAPTAEAHSFQSQVK
TLPSPSIDAKQQLQRKIQKKQQEQMLHSPLPGEAQARRADGGTPGVGSITCRSPALLSPH
PTIGIMVAAVPSPITVQRSRQLMSPSPVGTSEGKILPVNFQVVTQSMQPVKCPKTPQNIP
ASPVGDRSARHRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMQPTPHISSVNVVKMT
TISLAPNCSTTTTLTNTTLRPASAGMGSTVALEESRPSPRARSGSAAPILSPLARSGRAT
TTPTIDIKMMEGEAISEGSPALGASRLTMAQEAAGGQRAGGAVPRAASVPTPHTKGSLGL
EAMAGTKCNVKSSLCNNPVAATAGSNNNTNNESTLYLTVSNQNTSTTLSPNGGTVATSLI
ASKSPRKRPGIGPEFYPTPVKRVFISQQPLGGSDGYRHGIGAGVKKLPRAGTPVRPESAP
AIGKVTVKLNSTVPTRILSLSDSPIGTRGFQTVVKPQNSVQRRDTPTTMDTSSIGNVSAP
AGHARIQHMTGNIQSMPNSSALLEQSAVSDLRNTMWLGRRLEGGKQQQQQAYAQQITDHK
QASTPIMEPLAMMGQAPASSQLSMQTDMDYFHFNDDDMTQDSIVEELVQMEEQMKLNSSL
QAFGADVTVQGHQSVIQGNMMSSNQTVTPYYQSVHSSTTPVHTPTPTPTPTSEMMGGGQG
LTRESPCSRMAPTTPVDSALGSSRHTPIGTPHSNCSGSVPPSPVECRNPFAFTPINSSIT
GYHDGSIVSSSPVKPMQRPMATHPDKAKLEWMNNGYNNSGGNSINGISILPSYQDLVDDH
FRKPHAFAIPGQSYQSQTRHYGRLTPISPVQQQAASMANLNKQEGFAVPAPLDNKATSTS
SAGGTFRCRSVSPAVRQRNLSGNQGLQNIPRTVVSPFTSPVIPEMINIFANSHGDVSVSS
MAQRSQSVPVNVMMQTEVLPMQGQTNSKKITNVLLSKMDGDSDDAVRGLGINNLPSNYTA
RMNLTQILETTPSFPSSVNHQTLTSNAPNAYEFQKPGYLMKNSRNEQMSLSAGDSQAQSA
TGEEQHQQSQPMLLAQKLQQQQLDFSTTVKDLLADGSLTPGNRLVRQVSELNAVGSDFRL
TSDLSSSINDLNNLDTNLLFDPNQQQGQYEDSTLEELKNDPLFQQICSETANSNGFDWLE
SKDQPTVGLMG
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggatcaacaacaacatgatcagctcccgaagctgggctctggaataagcacc
ttaccatccctagttcctggactgcaagggactgaggccaatgcgttgcagctcaaaata
aagaattccatctgtaaatctgtacagtcaaaggtggacaatattttgaaagatgtggag
acgtttacagacatcgagaaactctacctctaccttaagttgccttctggtcccagcaac
agtgaaaaaaggactgagagagggtctgccagtcctggagaactgtcatgcagtgatcag
agctccatgtcatcaagccgcactcagcagatgcacgcgttcaactggatccgcaatcac
ctagaggaacacccagaaacctctctgcccaaacaggaggtctatgacgagtacaagagc
tattgtgacaatctctgctaccacccattgagtgcggcggactttggaaagatcatgaaa
aatgtatttccaaacatgaaggcacgtcgacttggcatgagaggcaaatcaaaatactgc
tatagtggactgaggaagaaagcctttgtccacatgccatctctacccaacctggagtta
cataaaacaggggacgggtgtgaggtgctggaggcctcaggtcagctgtgcagtgcggag
gaagaggtgcgctctgcggcctgtggcctggtgtgtgagtgggcccagaaggtgctgagc
cgccagtttgatgctgtggaggacctggctcgcttcctcctcaacagccactacatcggc
accaaatctgtggcagccctcacggtcatgactggtacaccaacaggagttaaaacacca
ctgccatcctcagcatttgcacccacagctgaagcccactccttccagtcccaagtgaag
accctgccctctccctccatcgatgccaagcagcagctccagcggaagatccagaagaag
cagcaggagcagatgctgcactcccccctccccggagaggctcaggccaggcgggctgac
gggggcacgcctggggtcggctccattacctgtagaagcccagccctgctctccccacat
cccaccattggcattatggtagctgcagtccccagccccatcacggtacaaaggagcagg
cagctgatgtcccccagtcctgtgggaacttcggagggcaagattctgcctgtcaacttc
caagtggtgacccagtcaatgcagcctgtcaagtgtcccaagacccctcagaatatccca
gccagccctgtgggggaccgctctgcccggcaccggtatgcccaaatcctgcctaaaccc
tcagccaccagcgccatcaccctgcgctcgccccccactctgctcatcaccaacagcccc
atcaagaccgtgatgcagcccacaccccacatcagctctgtcaacgtggtcaagatgact
accatatccctggctcccaactgcagtactacaaccaccctaaccaacaccaccttaagg
cctgcctctgctggcatgggcagcactgtagccctggaggagagcagacccagcccacgg
gccaggagtggctctgcggcccccatcctgtcccccttagccaggtcaggccgggccacc
accacccctaccatcgacatcaagatgatggagggtgaagccataagtgagggcagtccg
gccctgggtgctagcaggcttactatggctcaggaagctgcaggggggcagagggctgga
ggagctgtaccaagggctgccagtgtgcccacgcctcacactaaaggctccctgggactg
gaggcaatggctggaaccaaatgcaacgtaaagtcctctttgtgcaacaaccctgtggca
gctacagctggtagcaataataacaccaataacgaaagcactttgtatttgacggtctcc
aatcagaataccagcaccactctgtcacccaatggcggcactgttgccacatcactcatc
gcctccaagagccccaggaagcgcccaggcatcggcccagagttttatcccacgcctgtc
aaaagggtcttcatctcccagcagcctcttgggggttccgatggttacagacatgggatt
ggtgcaggagtgaagaaactccccagggcaggaaccccggtcagacctgaaagtgcacca
gccatcggtaaagttactgtgaaactgaactccactgtcccaactcgaatcctgtcactc
tctgattcccccatcggaaccagaggcttccagactgttgtcaagccacagaactccgtg
cagagaagagacactccgaccaccatggacactagcagcatcggcaacgttagtgccccg
gctggtcatgcacgaattcagcacatgacgggtaacatccaatccatgcccaacagttct
gccctactggagcagtctgctgtgagtgacctaaggaacacgatgtggctcgggcgccgg
ctggagggaggtaaacaacagcagcagcaggcctacgcccagcagatcacagaccacaag
caggcatccacaccgatcatggagcccctggccatgatgggccaggccccagcctctagc
cagctctccatgcagacagacatggactacttccatttcaatgatgacgatatgacccag
gacagcattgtggaggagctggtgcagatggaggagcagatgaagctcaacagcagtctg
caggccttcggagctgatgtgacggtgcaaggccatcagtctgtaatacagggcaacatg
atgtcctccaaccagacagtgaccccttactaccaatcagtacacagcagcaccacccct
gtccacacccccaccccaactcccacacccacctctgagatgatgggaggaggccagggc
ttgaccagggagagtccctgctcccgtatggcccctaccaccccggtggacagtgccctg
gggagcagccgacacacccccatcggcactccacactccaactgcagcggcagcgtgccc
cccagccctgtggagtgcaggaacccctttgccttcactcccattaactccagcattaca
ggctaccacgacggcagcattgtctccagtagccctgtcaagcccatgcagaggcccatg
gctactcatccagacaaggccaaactggagtggatgaacaatggttacaacaacagcggg
gggaactccatcaacggcatcagtatcctccccagctatcaggacctggttgacgaccac
ttccgaaagccccatgccttcgccatccctggccagtcctatcagtctcagacgaggcac
tacggccgcctgacacccatctctccggtgcagcagcaggcagccagtatggccaacctg
aacaagcaggagggcttcgctgtgcccgcccctctggacaacaaggccaccagcacatcc
tcagcaggcgggaccttccgctgtcgtagtgtgagccctgccgtgcgacagcgaaacctg
agtggcaaccagggcctgcagaacatcccccgaacagtggtgtcccccttcacctccccc
gtgatccccgagatgatcaacatcttcgccaacagccatggggacgtcagcgtcagcagc
atggcacagaggagccagtctgtgcctgtcaatgtgatgatgcagacagaggtgctgccc
atgcagggccagaccaacagcaaaaagatcaccaacgtgctcctgagcaagatggacggg
gacagtgacgacgcggtgcggggcctgggcatcaacaacctgccgtccaactacacagcc
cgcatgaacctcacccagatcttagagaccacgcccagcttccccagcagtgtcaaccac
cagactctgacttccaacgctccgaatgcgtacgagtttcagaagccaggttacctcatg
aagaactctaggaacgaacagatgagtctctcagcaggtgacagccaagcacaatcagct
actggagaagagcagcatcagcagagccagcctatgctgctggcccagaaacttcaacag
cagcagctagatttcagcaccaccgttaaagacctcttagcggacggcagccttactcct
ggcaatcggctcgtgcgacaggtgtcagaactcaacgctgtggggtctgattttcgactg
acctctgatctttccagtagcatcaatgacctgaacaatttggacacaaaccttctgttt
gaccccaatcagcagcagggacaatatgaagactctacactggaggaactgaagaatgat
ccgctgttccagcagatttgcagcgagactgcgaattctaatggatttgattggctggaa
agtaaagaccagcccacagtcgggttaatgggttaa
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