Oncorhynchus kisutch (coho salmon): 116359344
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Entry
116359344 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116359344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
116359344
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116359344
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116359344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
116359344
NCBI-ProteinID:
XP_031668131
Ensembl:
ENSOKIG00005050751
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MADVPVPPSSLRTEGILLREIHVNLLECKVCFEKYNPRQKERRPQNLSCGHVLCLECVRA
LSHPVLKKLECPFCRQLCDVDSTSHCQALTDLQDLLLSRSPRSPVPHRVRGGSGWVGGLG
SGALRLRSAFGGWGSLINPTGVAMFGSSGTMVVVHDGERRVVVFGPQGRRLHGFGRRGRG
HGEVCHPVDVAVTPSGYVVVTDAGDGAVKVFTTRGSYVLAVWDSFQMPWGVDVDSCGHIL
VTDIQAGTLSQVVVDFARGVTLMNRAVITDLQQPKAVACCRVTGNIALVEILGLTTTQPP
NGPRPTRLTIFNKDFNVLSQIDSFTLSLGASVWPCMSAVAFDRDGDVIVIDSQRGLIWGL
GKLQNGPVLTPLVSEDLVRPVGLVATAQNTLIVLDSGDHAVKMYSVHSDAILVQT
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttcctgttcctccttcctcactgagaacagaggggatcctgctgagagag
atccacgtcaacctgctggagtgtaaagtctgcttcgagaagtataacccacggcagaag
gaacgccggcctcagaacctgtcctgtggccatgtactctgtctggaatgtgtccgggcg
ctctcccaccccgtcctcaagaagcttgagtgccctttctgccggcagctgtgtgacgtt
gacagcacctcccactgccaggcgctgacagacctccaggatcttctgctctcccgctcc
cccaggtcacctgtccctcatcgggtcagagggggcagcggctgggtcggaggcctgggc
tctggagcactgcggcttcgctcagccttcgggggctgggggtccctaatcaaccccacg
ggggtggccatgttcgggtcctctgggaccatggtggtggtgcatgatggagaaaggagg
gtggtggtattcgggcctcagggcaggcggctgcacgggttcgggcggaggggtcgcggc
cacggggaggtgtgtcacccggtggatgtggcggtgactcccagcgggtatgtggttgtg
acggatgccggtgacggtgcagtgaaagtgttcaccaccagggggagttatgtcctggcg
gtgtgggactccttccagatgccctggggggtggacgtggacagctgtggacatatcctg
gtcactgacatccaggccggcacgctctcccaggtcgtggtggactttgcccgtggcgtg
actctgatgaaccgagcggtcataaccgacctccagcagcccaaggcagtggcctgctgt
cgggtgaccgggaacatcgccctggtggagatactggggctcaccaccacacaacctcca
aatggcccccggcctaccagactgacaatattcaacaaagactttaacgtgctctctcag
atagacagctttactctgagcctgggggcctccgtgtggccctgcatgtctgccgtggcc
tttgacagggacggggatgtgatcgtgatagactcccagcgtgggttgatttggggtttg
ggaaagctccagaacggcccagtcctaacccccctggtcagcgaagacttggttcgccca
gtggggctggtcgccacagcacagaacacgctgattgttttagacagtggagaccatgca
gtgaagatgtattcagttcactcggatgctattctagtccaaacatga
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