Oncorhynchus kisutch (coho salmon): 116359818
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Entry
116359818 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 3-like
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
116359818
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
116359818
TFIIIC, fungi type
116359818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_14
TPR_1
TPR_19
TPR_11
TPR_CcmH_CycH
TPR_12
TPR_9
ARM_TT21
TPR_10
ANAPC3
TPR_EMC2
PknG_TPR
DNA_pol_phi
DDHD
SMYLE_N
Motif
Other DBs
NCBI-GeneID:
116359818
NCBI-ProteinID:
XP_031669463
Ensembl:
ENSOKIG00005048340
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MSAFSSELIDYLEGRISFEEFEIRREERKAKLKVSNEGRSEEDEEIGPDDTLPSTSHDRS
PRKCSKKRPAADPEEGVSPSVQKAFASMMEEGTETEQTEEEEEEDEDNDDDYEEEEEEDS
EEERKVEAKGDEEGPSAGDVFALEMELNRENKKMMKERRNRSKLPRALRGLMGEANIRYA
RGDKEDAVLMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFGLIAAHLNPSDCEEWV
KLADMSLEQDNIRQAIICYTKAIKYDPSNVRYLWERCSLYEQVGEHKQSMDGYRRILNLL
PPTDGEHFMQLSRDMAKSYYESSDLPSAMGVMEEALRRHPELVTDESINMAAELYIANHQ
HDKALQVLVQFCGIVLERGEPKPDLAEEENPEEEQEKMESEENPEEEPNKMEAEEEEEQK
KMETEEENPEKEKEMKTEEPGEVREVVVPDHVPVDIRVKLMVCLIHQHVYRPLDSMLTSL
MEQSPEELGDLYLDVAEAFLDQGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGHM
EVAVKSYNRVVQMAPLHLEARLCLSTLQQQLGRPLCALKALEPMYDPDTLAQDASAAQQE
LKLLLHRSTLLRSQGRLDDYLDTMLTMLAMLLKVAMTRAQVCVKARMWAGVRHLRLVKVS
KDLVSDIHDQEAAYQDISGKTSVLSREDWWLLLVRCVCTLCEMKRFKEAELLVDSSLEFY
SFYDVKVKRKELEFFGLSAAFLDHNYRKAYDYIRLTLMEKQEWPMLWNVFNQVTLHSQDV
RHHRFCLRLMMKNPDNHALCVLSGHNALVSGSFKHALGQYVQAFRSNPDEPLYSLCVGLT
FFHMASQKFVVKRHPLILQGFSFLWRYVEQRGPCQESMYNLGRALQQMGLAHLAIHYYHK
ALSFPPLTLEGIADDQVDLRREIAFNLSIIYQASGNTEMVRHLINTYCTV
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgttcagctcagagctcattgactacctggagggaagaatttcattcgaggag
tttgaaatacggagagaggaaagaaaagctaaattgaaggtatcgaacgaagggcgttca
gaggaagatgaagagattggaccagatgacactctccccagcacttcccacgaccgcagt
ccgagaaaatgttctaaaaaacggcccgcagcggatcccgaggaaggcgtcagcccctct
gtccagaaggcctttgcctcgatgatggaggagggaacagagactgaacagactgaggaa
gaggaggaggaggatgaagacaacgatgacgattatgaagaagaggaagaggaggattca
gaggaggagaggaaggttgaagctaagggagatgaggaagggccctcagctggggatgtc
tttgctctggaaatggaacttaaccgagagaacaagaagatgatgaaggagagacgtaac
cgcagcaagctgccccgggccctaaggggcctcatgggagaagccaacatccgttacgcc
cgtggagacaaggaggacgccgtcctgatgtgtatggagatcatcagacaggccccgctg
gcctacgagcccttctccaccctggctatgatctatgaagaccagggggacatggagaag
tctctacagtttggcctgatcgctgcccatctcaaccccagcgactgtgaggagtgggtc
aagctggccgacatgtctctggagcaggacaacatcaggcaggccatcatctgctacacc
aaagccattaagtatgaccccagtaatgtgcgctacctatgggaacgttgcagcctgtat
gagcaggtgggggaacacaagcagtccatggacgggtaccgtcgtatcctcaacctactg
ccccctactgacggggagcacttcatgcagctgtcacgagacatggccaaaagctactat
gagagtagtgacctgccgtcagccatgggggtgatggaggaggccctgaggagacaccca
gagctggtgacagacgagagcatcaacatggctgctgagctctacatcgccaaccaccaa
cacgacaaggcccttcaggttctagtccagttctgtgggatcgtcctggagagaggagaa
cctaagccagaccttgcagaggaggagaacccagaggaggagcaggagaagatggaatca
gaggagaacccagaggaggagccgaataagatggaagcagaggaggaagaggagcagaag
aagatggaaacagaggaggagaacccagagaaagaaaaggagatgaaaacagaggagcct
ggggaggttagagaggtggtagttccagaccatgtaccagtggacatcagagtgaaactc
atggtctgtctgatccaccagcatgtttacagacctctggattccatgttgacgtctctg
atggagcagagcccagaggagctgggggatctgtacctggacgtggctgaggccttcctg
gaccagggagagtacaactcagccctgcctctcctctctgccctggtctgctctgagaga
tacaacctggctgttgtctggctccgacacgctgagtgtctgaaggcgctgggccacatg
gaggtagcagtgaagagttacaacagggtagtacagatggctcctcttcacctggaggcc
aggctgtgtctgtctactctgcagcagcagctggggcgacctctctgtgccctcaaggcc
ctggagcccatgtacgacccagacacactggcacaggacgcctccgcagcacagcaggag
ttgaagctgctgctacaccgctctactctcctgcgttcccaaggccgactggatgactac
ctggataccatgctgaccatgctggctatgctgctgaaggtggctatgacgcgggcccag
gtgtgtgtcaaagccagaatgtgggcgggggtcagacacctgcgtctggtcaaggtgtct
aaggacctggtgtcagacatccacgaccaggaggcagcctaccaggacatcagtggtaag
accagtgtgttgtctcgtgaggactggtggttactgttggtgaggtgtgtgtgtaccctg
tgtgagatgaaacgttttaaagaggcagagctgctggtagactcttctctggagttctac
tccttctatgacgtcaaggtgaagaggaaagagctggagttctttggtctgtcggctgct
ttcctggaccataactaccgcaaggcctacgattacatcagactgacgctgatggagaag
caggagtggcccatgctgtggaatgtattcaaccaggtgacccttcactcccaggacgtg
cgtcatcatcggttctgtctgcgtctgatgatgaagaacccagacaaccacgccctgtgt
gttctcagtggacacaacgcactggtgtctggcagcttcaaacacgcactcggtcagtat
gttcaggcgttcaggtctaatccagatgaacctctgtacagtctgtgtgttggcctcacc
ttcttccacatggcgtctcagaagtttgtggttaaacgccacccgctgatattgcaggga
ttctcattcctgtggcgttacgtggagcagcgtgggccctgccaggagagcatgtacaac
ctgggacgggccctgcagcagatgggcctggcacacctcgccattcactattaccacaag
gctctcagcttccctcctcttacactagagggtattgcggatgaccaggtagacctgcgt
agagagatagccttcaacctgtcaatcatctaccaggccagtggaaacactgagatggta
cgacacctcatcaacacatactgcactgtataa
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integrated database retrieval system
