Oncorhynchus kisutch (coho salmon): 116359883
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Entry
116359883 CDS
T09179
Name
(RefSeq) MHC class II transactivator-like
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oki01001
]
116359883
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oki04054
]
116359883
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116359883
Protein kinases [BR:
oki01001
]
Serine/threonine kinases: Other
TAF1 family
116359883
Pattern recognition receptors [BR:
oki04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116359883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
AAA_11
nSTAND_NTPase5
AAA_16
Piezo_TM25-28
RsgA_GTPase
nSTAND3
AAA_22
ABC_tran
DDRGK
Motif
Other DBs
NCBI-GeneID:
116359883
NCBI-ProteinID:
XP_031669622
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MSSPSLSPRTLDVLPLSPVDGAVAPDSMCSYPPGSLSDCASQALSPPSASPLSPRTEEYI
HQAKAHLRGMCQEMEAGLSLAFHYVDVRLVQRQILIDSGKSTSKCLEKDLVVIGDTERRR
GSLARSQVFESSPGAKPKRSIVLLGNAGMGKSTLIKKLCVDWSDGLLPQFDFVFLLDGKA
LTLPPEPTHSLRSLLLHLSCPHPRDVFNQVLSVPERVLVIFDGFEVVRDLEGLLQSPADD
SKGENYSVRQLFSGLLQRKLLPGCSLLLSARPRGTVSGLLRRADSLLELSGFSPPDIERY
LGQYFSGQSLESPISVPASDSIPVPTSVLAPVPDSVLASAPVSVPVPVSVPVPVPASVPV
SVPVPVPTSVPVPTSASVSASASVPVPVPTSASIPVLAPVPVPASVPVPVPVPVPVLAPV
PVLALTRLHSQPYLLSVCWNPALCHMVCLLLEHWDVSEPLPSTLTGLCYRVLLLKMRRHT
RKHTRCQTLPQTQTQAHTHTLKHSQNHVLKHTRNWTRTHIRTRSHTQSQNQLEDEKRRIE
TREEEEREEREKGREEKREEEEREREREREEGEKEREEKREEEEREGEEGEEEREEENRC
VLSELSGLAWQGVKGHSSLLTLTLDNTVYVKLRLFGLRTGLVHSHWLRGEQGRDGDGGGV
SSDNILSWAHPFLQSFLGGAHLSVSSCVSDRNLLAQILPQPRGRRRPQGECLDLAQRFAV
GLLFRNNAELRDLATLDTGAMKVVAAKRAAVISHLENLHHGDLSPARLLEACHCVYETGD
IRLVRHLVRNLPEVLSFQGVPLCPADAFVVWNLLDQCRTLRRRFCLGLEDTGLRMTGLKL
LTGLNNIHSYRACIADTITLWEELEQSGEEELLKAVVSKLTLNPFRATQVSHVQHLSTLV
HLHTSRRLSESQSDGVLGEGWGPVNGPLALPKLLELLPALHSLHHLDLENSKLGDSGAEG
LAGAVLSLSSLQIINLSQNCIGDQGIRSLAPALSTLPSLHCLSLYSNVISDGGAESLAAV
LPQMTSLSDLDVKYNSFTALGAQSLASSLRDCPWIKSLGMWNVCIPYGVLERLQQQDPRI
QLL
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctccctcgctgtctcctagaaccctcgacgtcctacctctctctccagttgac
ggcgcggtagctccagattcgatgtgttcgtatcctcctgggtctctgtctgactgtgcc
agccaagccctgtctcccccctctgcctcccccctctcccccaggacagaggagtacatt
caccaagccaaggctcacctgaggggaatgtgccaggagatggaggcgggccttagcctg
gcgttccactatgttgacgtgcgattggtccagaggcagatcctgattgactcagggaag
agcaccagcaagtgcctggagaaagatttggtcgttatcggagacacggagaggaggcgg
ggctcgttggccaggagtcaggtgtttgagagctcccccggggcgaaacccaaacgttcc
atcgtgttgctaggcaacgccggcatgggcaaaagcacgctcatcaagaagctctgcgtt
gattggtccgacggcctcctgcctcagtttgactttgtgttcttactggacggtaaggct
ctgaccctcccccctgagccgacccatagcctacggtccctcctcctacacctctcctgc
ccccacccacgggatgtcttcaatcaggtcctctctgtcccggagcgtgtgctggtgata
ttcgatggcttcgaggtggtgcgtgacttggaggggctgcttcagtctccagcggatgac
agtaaaggggagaactacagtgttagacagctgttctcaggtctgctccagaggaagctc
ctaccaggctgctctctgctcctctctgcccgaccacgaggcactgtcagtgggctgctg
agacgggctgacagccttctggaactctctggcttctcccctccggacatcgagagatac
ctgggacaatacttctctggacagtccctagagtccccaatctcagtcccagcctcagac
tcaatcccagtcccaacctcagtcctagcaccagtcccagactcagtcctagcctcagcc
ccagtctcagtcccagtcccagtctcagtcccagtcccagtcccagcctcagtcccagtc
tcagtcccagtcccagtcccaacctcagtcccagtcccaacctcagcctcagtctcagcc
tcagcctcagtcccagtcccagtcccaacctcagcctcaatcccagtcctagccccagtc
ccagtcccagcctcagtcccagtcccagtcccagtcccagtcccagtcctagccccagtc
ccagtcctagccctcaccaggctccacagccagccgtaccttctgtctgtgtgttggaac
ccagctctgtgtcacatggtctgtctgcttctagaacactgggatgtttcggagccactc
ccctccacgctgactggactgtgttacagggtgttgctactaaagatgagacgacacacc
cggaaacacacacgctgtcaaaccctaccccaaactcaaacccaggcacacactcacacc
ctgaaacacagtcaaaaccacgtcctgaaacacacacgcaactggacacgaacacacatc
cgcactcgctctcacactcaatcccaaaatcaattagaagatgagaagaggaggatagag
acgagagaggaggaagagagggaggagagagagaaagggagagaggagaagagggaggag
gaagagagagagagggagagagagagggaggagggagagaaagagagagaggagaagagg
gaggaggaagagagagagggggaggagggagaggaagagagagaggaagagaacaggtgt
gttctgtcagagttgagcggtctggcttggcagggggttaaaggtcattcatctctcctg
accctgactctggacaataccgtctatgtcaagctgcggttgtttggcctgaggactgga
ctggtccattctcactggctgaggggggagcagggcagagatggtgacggtggcggcgtg
agttccgacaacatcctgtcctgggcccaccctttcctgcaaagcttcctgggtggggcc
cacctgtccgtctccagctgtgtgtctgaccgcaatctgctggcccagatactaccacag
cccaggggaaggcgacggcctcagggagagtgtctggaccttgctcagagattcgctgtc
gggctgcttttccggaacaatgcggaactccgggatctggccaccctggataccggcgcc
atgaaagtggtggcggccaagcgagccgctgtgatatcacacctggagaaccttcaccat
ggcgacctgagccccgctcggctcctggaagcgtgtcactgcgtttacgagacaggcgac
atccgcttggtcaggcacctggtacggaaccttcccgaggttctgtcgttccaaggggtt
ccgctgtgccccgccgacgccttcgtagtgtggaaccttttggaccagtgtagaacgctg
aggaggaggttctgtctggggctggaggacacaggactgaggatgacaggattaaaacta
ctgacgggtctcaacaacatacactcatacagggcgtgtatcgctgacaccatcactctg
tgggaggagctagagcagagtggggaggaggagcttctgaaagcggttgtgtccaagttg
acccttaaccctttcagagccacacaggtgtcccacgtccaacacctgtccacactggtc
cacctacacacaagcaggagactgtctgagagccaatcagatggtgtcctgggggagggt
tgggggccagtgaatggtcctctggcgctccctaaactcttggagctgctgccagccctg
cacagtctacatcacctggatctggagaacagtaaactgggggacagtggggctgagggg
ctggctggagctgtgctgtctctctcctctctgcagattatcaatctgtcccagaactgt
ataggagaccagggaataaggagtctggctcctgctctgtctaccctcccctcactgcac
tgtctcagtctgtacagtaatgtgatatctgacgggggtgctgagagtctggctgctgtt
ttacctcagatgacatcactcagtgacctggacgtcaagtacaacagtttcacggccctg
ggagctcagagtctggcttccagtctgagggactgtccatggatcaagagtctggggatg
tggaatgtgtgtattccctacggagtgttagagagactgcaacaacaggacccacggata
caactgctctag
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