Oncorhynchus kisutch (coho salmon): 116359917
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Entry
116359917 CDS
T09179
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
oki04137
Mitophagy - animal
oki04144
Endocytosis
oki04340
Hedgehog signaling pathway
oki04350
TGF-beta signaling pathway
oki04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116359917 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116359917 (smurf1)
04350 TGF-beta signaling pathway
116359917 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116359917 (smurf1)
04137 Mitophagy - animal
116359917 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
116359917 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
116359917 (smurf1)
04121 Ubiquitin system [BR:
oki04121
]
116359917 (smurf1)
03029 Mitochondrial biogenesis [BR:
oki03029
]
116359917 (smurf1)
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116359917 (smurf1)
Membrane trafficking [BR:
oki04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116359917 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
116359917 (smurf1)
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
HECT type E3
116359917 (smurf1)
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116359917 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
116359917
NCBI-ProteinID:
XP_031669813
Ensembl:
ENSOKIG00005022022
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MSGPGSRRTGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKRQGAGFLGCIRLLANSISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDGLGSGGPVVDCRGLLENEGPVFESCFSEEPLPYSDPTGA
AGGGTCPPDSPNQENRLQAQRIRGQDSQRHTHTPQNRPHGNQSPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPAGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQHSQVKDSSQPLGGGGGREMEVGGEEGGEGEVTLRYERDLVHKLKLLRHELS
LQQPQAGHCRIEVSRDEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYL
LCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHSHYINGGF
TLPFYKQLLGKPIMLQDLETTDPELHKSLVWILENDISSVLDHTFCVEHSAFGKFLQHEL
KPNGQNLPVTEDNKKEYVKLYVTWRFMRGIEAQFLALQKGFSQLIPQHLLKPFDHKELEL
IIGGLGKIDLADWKSNTRLKHCAVDSNVVCWFWEAVESFTEERRGRLLQFVTGSTRVPLQ
GFKALQGSTGSAGPRLFTIHLIEANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEE
TCGFAVE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtcctgggtctcggaggaccgggtccagcatcaaaatccgcctgacagtctta
tgtgccaagaaccttgcaaagaaagacttcttccggttgccggacccatttgcaaaggta
gtggtggatggatcaggacagtgtcattctacagacacagtgaagagcactctggacccc
aaatggaaccaacactatgacctgtacatagggaagacagactccatcaccatcagtgtg
tggaaccataagaagatccacaagcggcagggcgccgggttcctgggctgcatacgactg
ctggctaactccatcagcagactgaaagacacgggctaccagcggttggatctgtgtaag
ctgaatccatcagacagtgatgcagtacggggacagatcgtagtgagcctccagaccaga
gatggtttgggcagcggaggacccgtggtcgactgtagaggactgttagagaatgagggg
cctgtgtttgagagctgtttcagtgaggagccgctgccgtactcagaccccacgggcgcc
gctgggggcgggacctgtccaccggattcacccaaccaggagaaccggctccaggctcag
cgaatcagaggccaggattcccaaagacacacccacacccctcagaaccgaccgcatggc
aaccaatcacctgatctacctgagggatacgagcagcgcaccacggtgcagggacaggtg
tattttcttcacacacagacgggagtcagcacctggcatgacccacgcatacccagggac
ctggccagtgtgagctgtgaggagttgggtccgctgccagccggctgggaggtgaggagc
acggtgtcgggacggatctactttgtggatcacaacaaccgaacaacacagttcactgac
ccccggctacacaccatcatcagccaacactcccaggtgaaggattcgtctcagccgctg
ggtgggggaggcgggagagagatggaggtggggggggaggagggaggagaaggggaggtg
acactgcgttatgagagagacctggtccacaaactgaagctgctccgacacgagctgtca
ctacagcaaccacaggccggacactgtcgcatagaggtctcacgagacgagatctttgag
gagtcttatcgtcagatcatgaagatgagacccaaggatctgaagaaacgactgatggtg
aagtttagaggagaggaaggactggactacggaggagtggcaagggagtggctgtacctg
ctgtgccatgagatgttgaacccgtactacggcctgttccagtactcaacagacaacatc
tacacactacagatcaaccctgattcctctataaaccctgaccacctgtcgtatttccac
tttgtgggtcgtgtgatgggcctggcagtgttccatagtcactatatcaacggaggcttc
accctgcccttctacaagcagctgctggggaaacctattatgctacaagacctggagacc
actgatcctgaactacacaagagtctggtctggatactggagaatgacatctcgtcggtt
ctagatcatacgttctgcgtggaacacagtgccttcgggaagttccttcaacatgagctg
aaacccaacggtcagaacctcccggtaaccgaggacaacaagaaggagtacgtgaagctt
tatgtcacctggaggtttatgagggggatcgaggctcagttcttagctctgcagaaagga
ttcagccaactgattcctcaacacctcctcaaaccatttgaccacaaggagctggagttg
ataatcggaggcctggggaagatagacctagcagattggaagtctaacacccgtttgaag
cactgtgctgtagacagtaatgtggtttgctggttctgggaggctgtagagagcttcact
gaggagaggagaggacgactactgcagtttgttaccggttctaccagagttccactacag
ggattcaaggcactacagggttctacaggttcagcaggcccaaggctgttcaccatccat
ctgatagaggccaacacagacaacctacccaaggcacacacatgttttaacagaatagat
atccctccctacgaatcgtacgagaaactttatgagaaactgctgacggccgtggaggaa
acttgtggcttcgctgtggagtga
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integrated database retrieval system
