Oncorhynchus kisutch (coho salmon): 116359934
Help
Entry
116359934 CDS
T09179
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116359934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
116359934
03019 Messenger RNA biogenesis [BR:
oki03019
]
116359934
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116359934
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116359934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
116359934
NCBI-ProteinID:
XP_031669885
Ensembl:
ENSOKIG00005044551
UniProt:
A0A8C7KK75
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MQDLIATVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFMRAACLKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICMNYLVGFCPEGRSCKFMHPRFELPMGATEQPP
LPAQILGHQKPMPSLGRSSLSLIQLTNPGGGAGPHQHQHHQRQPYSSGPSMHQHHNNMGG
GNRGPRPLDQVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacctgatagccaccgtggaccacatcaagtttgatctagagatagctgtggag
cagcagctgggggctcagcctctccctttccccgggatggacaagtccggggctgctgtg
tgtgagttcttcatgagagcagcctgtctcaaaggtgggatgtgtccgttccgtcacatc
agtggggagaagacggtggtgtgtaaacattggctcagaggactctgtaagaagggagac
cagtgtgagttcctacacgagtacgacatgaccaagatgcccgagtgttacttctactcc
aagttcggagagtgcagtaacaaggagtgtccgttcctccacatcgacccagagtctaag
atcaaagactgtccctggtatgacagaggcttctgcaaacatggtccagactgtagacat
cgccacaccagaagagtaatctgtatgaactacttggttggtttctgtccagagggccgg
tcctgtaaattcatgcacccgcggtttgagctgccgatgggagccacagaacagcctcct
ctaccagcacagatactgggtcaccagaagccgatgccttcgcttggccgctcgtccctg
tcactcatccagctgaccaatcccgggggaggtgcaggtcctcaccagcatcaacaccat
caacgccagccatactcctctggtcccagcatgcatcagcaccacaacaacatgggagga
gggaacaggggtccacgcccactagaccaggtcacctgctacaagtgtggtgagaagggc
cactatgccaataaatgcaccaaaggacacctggccttcctcagtggacagtaa
DBGET
integrated database retrieval system
