Oncorhynchus kisutch (coho salmon): 116360121
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Entry
116360121 CDS
T09179
Name
(RefSeq) iroquois-class homeodomain protein irx-3-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
116360121
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116360121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
116360121
NCBI-ProteinID:
XP_031670649
Ensembl:
ENSOKIG00005001708
UniProt:
A0A8C7CFW0
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Position
LG3:complement(75346754..75350172)
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AA seq
460 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERQGISNARAGTELSPSGALSNVLSTMYGSPFAAAAQGYGAFL
PYSNDISIFNQLGAQYELKDSPGVQGHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRSRTD
EEGNVYNSDHEEGEEGDKREDEEEIDLENIDTENIENKDDLDDQDDLHADLKLDGRSDSE
ISDGYEDLQGPDQRFLKAVVKEGKDIHVDRGEHFHHHHHSFEIKASQPNGEQVKLNPVSI
NSPPSENNAAPAQKPKIWSLAETATTPDNPRKSPQMNGSNTVGPAAQTIISPHHRLISCP
VGKIQNWTNRAFSAHQLALLNSNHYLGLANQASANGLALYSRQQHQHTQDKSHSSDTAVT
ERSSALEAEKKLLKTAFHPVHRRPQNQLEAAMVLSALASS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctgggatatcagtacatccgaccgatatacccaccggagcgccag
ggtatcagcaatgcccgagccgggacggagttgagcccgtccggggcactctcaaacgtt
ctctcaactatgtatggatcacctttcgccgcagcagcacagggctatggagcatttctg
ccctattcaaacgatatatcaattttcaatcaattgggtgctcagtatgagttgaaagac
agtccaggcgtacaaggacacccaggatttgcccaccatcacccagcgttttacccatat
ggccagtatcagtttggtgacccgtccagacccaaaaatgcgaccagggagagcacgagc
acactgaaggcctggctaagcgagcatcgtaagaacccctaccccaccaagggggagaag
atcatgctggccatcatcaccaaaatgaccctcacccaagtttccacctggttcgccaac
gccaggaggaggctaaagaaggagaacaagatgacctggactccccggagccgcacagac
gaagagggaaatgtttacaacagtgatcacgaggagggagaggaaggggacaagagggag
gatgaggaagagattgatttagaaaatatcgacacggaaaatatcgagaataaggacgac
ttggatgatcaggatgacctacacgctgatttaaaattagatggtagaagcgactctgag
atttcagacggctatgaggatttacaagggcccgatcagagatttctgaaggccgtagtg
aaggagggcaaagacattcacgtggaccggggcgagcacttccaccaccaccatcactct
tttgaaattaaagcctcacaaccgaatggcgaacaagtgaaactgaatcctgtgtccatc
aactcgcccccatcagaaaataacgcggccccggcccaaaagccaaagatttggtctttg
gcggagacagcaacaactcctgacaatccccgcaaatctccacaaatgaatggcagcaac
acagttgggcccgccgcccagaccataatcagccctcaccacagactcatctcttgtcct
gttggaaaaatccagaactggacaaacagagctttttctgcccaccagctcgcattactg
aactctaaccattaccttggactggcgaaccaggcttcggctaacgggctcgccctctac
agcaggcagcaacaccaacacacgcaggacaagagtcatagctcagacacagccgtcaca
gagagatctagtgccttggaagcagagaaaaagttgttaaaaacagccttccacccagtt
catagacggcctcagaatcaactcgaagcagccatggttctgtcagctctcgcctcctcc
tag
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