Oncorhynchus kisutch (coho salmon): 116360502
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Entry
116360502 CDS
T09179
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
116360502
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116360502
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
116360502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
116360502
NCBI-ProteinID:
XP_031671015
Ensembl:
ENSOKIG00005036829
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MGCNLCSLQKREEHYKLLYEISQVNGRDYSKASHDEMVEVIRRDPIVVQVVRRHGNPTHS
HQTLQEVHVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHTMEHEFYE
CPEYLSNTPAEVDRPEEFEYEQVELCRLNSQEKLGLTLCYRTDDEEDTAIYVSHVGRNSI
AARDGRIREGDRILQINGCDVQDRQEAFTLLSNEESRSIVLLVTRPEEAWLDEEHNELLE
ELKMEILEERRNEEVQKTGGGEEQAKQLEEDDVMTDTATCSSNTQDKDSGLGTGRNEESS
EQEVLLARVHRRPAQGLRDRWRAKHGQGLGKRVVVPSDTQGPRGLIQAQEGEGGVGLGLE
CDSRFKQLLELKCQIRNSGECGVYYSRRSTIECSLTEQSGVGVSGGGGMEQELRMLNDEL
RSIELECQSIMQAHQLRKNQRDPPCTPMCSPGRSPKHGREQHAKLADINEHPGERQWDSD
KLRGDKDSSSAYNTAESARSTPLGMERSPDHSLQRRISLTNQKNLRSTMAASGQSISIPI
PDRELLSETSTGPTTHSRQDPNSSPGTTVISSSPDQSNPSPSESDPALPADDERCDRTRS
HRGPRRLPPYPSPYHTAPQQGTSPAHARHLQSYMQQLLQQTSSLETYSQSQLSLLSVCRD
RSTRPGEPRLEWKVKVRADGTKYVARRPARDRILRERALRIREERSGGMTTDDDTMSEMK
MGRYWSKEERKQQLARAREQRRRREYMQRSRLECLREGPGSGAEGRKEVNILELSHKKMM
KKRNKKILDNWMTIQELMSHGARAPEDQGSKQVHNAFLSVTTV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgctctttacagaaacgggaggaacactacaagctgctgtatgag
atttcacaggtgaatggcagggactactccaaggccagccatgacgagatggtggaggtc
atcagaagagaccccatcgtggtgcaggttgtccgtcgccatggcaaccccacccactca
caccaaacattacaggaagttcacgtggtggacgtgtgcacgcagacggatatcactttt
gaacacatcatggccctggctaagctgaggcctgctactccacctgtacccgacatctgc
ccctttctgctgtcagacagctgtcactccatccacaccatggagcatgaattctacgag
tgtccagagtacctctccaacaccccagctgaagtggacaggccagaggagtttgagtat
gagcaggtagagctctgtcggctcaacagtcaggagaagttgggtctgacgctgtgctat
cggactgacgacgaagaggatacagctatttacgtcagccatgttggacgtaacagcatc
gctgccagggacgggcgcattagggaaggagatcgaatattacagatcaatggctgtgac
gtacaggacaggcaggaagctttcactctcctgtccaatgaggagtccaggagtatcgtt
ctcctggtgaccagaccagaggaggcgtggctggatgaggagcacaatgaactcctagag
gagctgaagatggagatccttgaggagaggaggaacgaggaggtgcagaagacaggagga
ggagaggagcaggccaagcagctggaggaggatgacgtcatgacagacacggccacgtgt
tcctccaatactcaggacaaagacagcggcttggggacggggcgcaacgaggagagctcc
gaacaggaagtcctcctggcccgtgtccaccggaggcctgcccagggcctgagagaccga
tggagggccaagcatggccaggggctgggcaagagggtggtggtaccctcggacacccag
ggacccaggggtctgatccaagcccaggagggtgagggtggagtggggttaggactggag
tgtgacagccgcttcaagcagctcctggagctcaagtgccagatccgtaacagcggggag
tgtggtgtgtactatagcaggagaagcaccatcgagtgcagcctgacggagcagagcggg
gtgggggtcagtggtggtggagggatggaacaggagctgaggatgttgaacgatgagctg
aggagtattgagctggagtgtcagagcatcatgcaggcccaccagctccgtaagaaccaa
agggatcccccctgcacccctatgtgctccccaggacgaagccccaaacatgggcgtgag
cagcatgccaagctggccgatatcaacgagcatccaggggaaaggcagtgggacagcgac
aagctaaggggggacaaggacagctccagtgcctataacacggctgagagcgccaggtcc
actcctctaggcatggagagatccccggaccactctctacagagacgcatcagcctcacc
aaccagaagaacctccggagcaccatggcagcctccggccagtccatctccatccccatc
ccagacagagagctcctgagtgagacctcgaccgggcccaccacacacagccgacaggat
cccaactccagccctggaaccacggtcatctccagcagccccgaccagtccaacccttcc
ccctccgagtcagacccggccctgcctgcagacgacgagcgctgcgaccgcaccaggagc
caccgggggccacgcaggctccctccctacccgtccccttaccacacagccccccagcag
ggcacctctccagcccacgccagacaccttcagagctacatgcagcagctcctccagcag
acctccagtctggagacctactcccagtcccagctcagcctcctcagcgtctgccgggac
cgctccacccgcccgggggaaccacgcctcgaatggaaggtcaaagttcgagccgacggg
acgaagtatgtagcccggcgaccggcgagggaccggattctacgagaacgggcgctgagg
atcagggaggagcgtagtggagggatgaccacggacgacgacactatgtccgagatgaag
atggggcggtactggagtaaagaggagagaaagcagcagctggccagggccagggagcag
aggaggaggagggagtacatgcagaggagccggctggagtgtctcagagagggccctggg
agcggggccgagggccgtaaagaggtcaacatcctggaactcagccacaagaagatgatg
aagaaacgcaacaagaagatcctggataactggatgaccatccaggaactaatgagtcac
ggggccagagcacctgaggaccaggggtctaaacaagtacacaatgccttcctgtctgtt
actacagtatag
DBGET
integrated database retrieval system
