KEGG   Oncorhynchus kisutch (coho salmon): 116360600
Entry
116360600         CDS       T09179                                 
Name
(RefSeq) mRNA-decapping enzyme 1B-like
  KO
K12611  mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116360600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    116360600
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     116360600
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     116360600
SSDB
Motif
Pfam: DCP1 mRNA_decap_C WH1
Other DBs
NCBI-GeneID: 116360600
NCBI-ProteinID: XP_031671377
Ensembl: ENSOKIG00005041119
LinkDB
Position
Unknown
AA seq 682 aa
MTASSSGGNTCLTAKGLDISLAALQRQDPYINNIVDVASQVALYTFNNRSNEWEKTDVEG
TLFVYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQDPFLLYRNARLAIYGIWFYDK
ADCQRIAELMKYLTKQEQALAQRGQQGQGGLVSPRALEAAGDPGKGQGVDILQMLTKARN
EYDKGGQPEPKEIGGCSVLNANPSLIKPIPVKPMESYPQPGLQERPVQDGRGEPRPLSLA
TLFGVQQPRAELVSPMAGSGGPGSQPQGKPGGVRPAVARSLSYDDPVQAQLRLQAQEGGL
ISGSSPPQHCPAFQKLMKDAASSSQPQKQLQRGGPMEQLQPVSESPENRLHENGAPSVLH
HQTQARQDPIQRLFQNQPTSTTPSMTTSAPCCPRPPPLIPGLQSARPQPLLVDALGFPGS
QHHHLPPHQARPLYFSPTKPPQMLVPMLPSHPSQPQPPHQPQPGHPQSQPCHPFHPFQHP
QPLYLQPLPGHPQPGQLTGVVSPHELLQRLQLVQQEQSLVPEPTRTSSNLAPRFHEPAPL
APSAPPAMGQHGQQSAHSTARSLDSLADKNSAGTAAQKFQVISPQRIPATVAPTLLLSPS
VFSQAKRPQAQASGDTHCPPGPHPPSALLAPQAPDDPQPRGLSKSQLQATLLHLIQNDSS
FLDTIYESYAHRFSTDATANKF
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgacggcaagctcatcgggtggaaacacctgtctcactgctaaaggtttggacattagt
ctcgcagccctgcaaagacaagatccttacatcaacaacattgtagatgtggcgagtcaa
gtggcgttgtatactttcaacaaccgatcaaatgaatgggagaagactgacgtggagggg
accctgtttgtctatacaaggctagcatctcccagacacggcttcaccataatgaacagg
ctgagtatggagaacctgactgaacccatcactaaagacctggacttccagctgcaggat
ccgttcctgctctacaggaatgctcgcttagctatctatggcatctggttctatgataag
gcggactgccagcgcatcgcagagcttatgaagtatctgacgaaacaggaacaggccctg
gcccagcggggtcaacagggtcaggggggcttggtgtctcctcgagccctggaggcagca
ggggaccctgggaagggacaaggtgtggacatcctgcagatgctgaccaaagcacgcaat
gagtatgacaagggtggccaaccagagcctaaagagataggagggtgtagtgtccttaat
gccaaccccagcctgatcaaacctatccctgtcaaacctatggagagttatccccagcct
gggctacaggagaggcctgttcaggatggtcgaggagagcccaggcctctctctctggcc
actctgtttggtgtccagcagcccagagcagagctggtctctcccatggctgggtcagga
ggtccagggtcccagccccaggggaagcctggaggtgtccgcccggcggtggcccgctcc
ctgtcctacgacgacccagtccaggcccagctccgtctccaggcccaggaagggggtctg
atctcaggtagcagccccccgcagcactgccctgccttccagaagctcatgaaggatgcc
gcctcctcctcccagcctcagaagcagctccagagaggaggtcctatggagcagctccaa
cccgtctccgagtcacccgagaacagactgcatgagaacggagccccctctgtcctccac
catcagacccaagccagacaagaccccatccagagactgttccagaaccagcccacttcc
accaccccttcaatgaccacctccgctccctgttgtcctcgtcctcctcctctcatccct
ggtctccagtctgcccgtcctcagcctctcctggtggatgctttgggcttccctggttct
caacatcatcacctccctcctcaccaggcccggccgttgtacttcagccccaccaagccc
ccccagatgctggtccccatgttgccctcacacccctcccagcctcaacctccccaccaa
ccccagcctggtcatcctcagtcacagccctgtcaccctttccaccccttccagcacccc
cagcccttatacctccaacccctgccaggtcatccccagccggggcagctaaccggtgtc
gtctccccccatgagctgctccagaggctgcagctggttcaacaggagcagagtctggtc
ccggagcccactaggacttcctctaacctggctcctcgcttccacgagccagcccctcta
gccccctcagcccccccagccatggggcagcacggccagcagtcggctcattctacagcc
aggtctctggacagtttggctgacaagaactctgcaggcaccgctgctcagaagttccag
gtgatctccccccagcgtatcccagccacggtggcacctaccctgctcctgtcccccagt
gtcttctcccaggccaagcgcccccaggcccaagcctctggggacacccactgcccccct
ggccctcatcctccctcagccctcctggccccacaggccccggacgacccccaacccagg
ggcctctctaagagccagctccaggccaccctgctgcacctcatacagaacgacagttcc
ttcctggataccatctatgagtcctacgcccaccgcttctccacggacgccaccgcgaac
aagttctga

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