Oncorhynchus kisutch (coho salmon): 116362164
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Entry
116362164 CDS
T09179
Name
(RefSeq) replication factor C subunit 1-like isoform X1
KO
K10754
replication factor C subunit 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03030
DNA replication
oki03410
Base excision repair
oki03420
Nucleotide excision repair
oki03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116362164
03410 Base excision repair
116362164
03420 Nucleotide excision repair
116362164
03430 Mismatch repair
116362164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oki03032
]
116362164
03400 DNA repair and recombination proteins [BR:
oki03400
]
116362164
DNA replication proteins [BR:
oki03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116362164
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116362164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_5
AAA_7
RuvB_N
AAA_30
Rad17
AAA_16
AAA_33
AAA_17
AAA_14
BRCT_2
nSTAND3
AAA_18
NPHP3_N
NTPase_1
RNA_helicase
AAA_19
Zeta_toxin
TIP49
Viral_helicase1
AAA_28
Motif
Other DBs
NCBI-GeneID:
116362164
NCBI-ProteinID:
XP_031672331
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MMKKREEEEEGGGKTNLSINASVSPKKEFLTPSSTDRKSKLKTGSATMVTTPTTLKTPKK
ESTSPEESEKKRGNSSAFRSFLNRDGPRALGSKPIPTGAENCLEGCVFVISGVLESMERE
DAKSLIERNGGKVTGNISKRTTYLVMGRDGGAAKTEKAEGFGTKILDEDGLLELIRSTPG
KKSKYLIAAEAENKGFKSRTPDTKTTSRTPKQSPKTRSMTPSPSKPGSASGQGVRVGDRV
TLPGRGTGSGVKRGLDLGGKSQSSSSSATLSLPSFAGEDFSLLWVDKYRPRNLKAVIGQQ
GDQSQANKLLRWLKNWHTHHVVGGAKTAGRGFGKFTSTKDNGSSFKAALLSGPPGVGKTT
TAALVCEELGYSYVEMNASCTRSKNSLKQVIAESLNNTSINNFYTGSSQTVSSKHVLIMD
EIDGMAGNEDRGGIQEMIGLIKQSRIPIICMCNDRNHQKIRSLANYCFDLRFQRPRLEQI
KGAMMSIAFKEGLKVPPPALNEMILASNQDIRQVLHNLSMWSAKDKVMTYDRVKEDANNA
RKDMKLGPFDVCRKVFSKGEESGHMTLIDKSDLFFHDYSLAPLFVQENYIHVKPAAAGGD
MKSHLVLLSKTADSICDGDLVDKQIRSKQAWSLLPTQAIYSSVLPGELMSGYMKSFPSFP
SWLGKFSSGNKHSRIIQELASHMSLKTLSSRQAVSLDYLPYLRMALLCPLQRQGAEGAGQ
AVQLLDDYHLVREDVDSLMEISLWGGQPDPYAKLDPKVKSAFTRAYNRETHLTPYSLQPI
KKGRRGGGVEAEPGGEGQEEQPEEEEEEEGVAADAMIKLKKTKPSKEPKKEKTTAGDSGK
GKGKGKGKARK
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaaaagggaggaggaagaggaaggaggaggcaagacaaatctgagtatcaat
gcgtccgtctctcccaaaaaggagttcctaaccccttcaagcacagacaggaagtcgaag
ctcaaaacaggaagtgcaaccatggtgaccacacccaccactcttaaaacccccaagaaa
gagagcaccagtccagaggaatcagagaagaagcgagggaactcctcagccttccgtagt
ttcctgaaccgagacggacccagagccctgggatctaaacccatacccactggagcagag
aactgcctggagggatgtgtgtttgtgatctctggtgtgttggagagtatggaacgtgag
gatgcgaagtctctgatagagcgcaacggagggaaggtgaccggtaacatcagtaagagg
acgacatacctggtgatgggcagagatggaggagccgccaagactgagaaggcggagggg
tttggaactaagatcctggatgaggatggtctgttggagctcatcagaagtacaccaggg
aagaagtccaagtacttgattgctgccgaggcagagaacaagggatttaagagcagaaca
ccggacaccaagaccacctcccgcacccccaaacagtcccccaaaactcgctccatgacc
cccagcccctccaaacctggctcagcgtcggggcaaggagtcagggtaggggacagagtg
accctcccagggaggggtacaggttcaggggtcaaaagagggctggacttggggggtaag
agccaatcatcttcctcctctgccactctgtctttgccctcattcgcgggtgaagatttc
agtctgctgtgggtggataagtaccgcccccggaatctgaaggctgtgattggtcagcag
ggagaccagagccaagccaataagttgcttcgctggctgaagaactggcacacccaccat
gtagtgggaggggctaaaacagcagggagagggtttggtaagttcaccagtactaaggat
aatggttcaagcttcaaggcagccctgttatctggacctcctggcgtgggcaagaccacc
acagctgccttggtctgtgaggagctgggctacagctatgtagagatgaatgccagctgt
actcgtagtaagaacagtctgaaacaggtgatcgctgagtctctgaacaacaccagtatc
aacaacttctacacaggttcgtctcagacagtcagtagtaaacatgttctcatcatggat
gagattgatggcatggccggcaacgaagaccgcggaggaatacaggagatgataggtctg
ataaaacagtccaggatccccatcatctgtatgtgtaacgaccgtaatcaccaaaagatc
cgctctctggccaactactgctttgacctgcgcttccagagaccacgactggagcagatc
aagggtgccatgatgtccattgctttcaaagagggtctgaaagtcccgcctcctgccctc
aacgagatgatcctggcatccaatcaggacatccgacaggtcctccacaacctgagcatg
tggtcggctaaggacaaggtcatgacctacgaccgggtcaaagaggacgccaacaacgca
cgcaaggacatgaagttgggtccgttcgacgtgtgtcggaaggtgttctccaagggggag
gagtcaggtcacatgacgttgattgacaagtcggacttgttcttccacgattactccctg
gcccccctcttcgtccaggagaactacatacatgttaaacctgctgctgctggtggtgat
atgaagtcccacctggtcctcctcagtaagacagctgattctatctgtgatggagacctg
gtggacaaacagatacgttccaaacaggcctggtctctactgcccacacaggccatctat
tccagtgtgttaccaggagagttgatgagtggttatatgaagtccttcccctcgtttccc
tcctggctgggaaagttttcctccggcaataaacactcccggatcattcaggagctggcc
tctcacatgagcctcaagacattaagtagcagacaggcagtgagcctggactacctcccg
tacctccgcatggccctgttgtgtcctcttcagaggcagggggcggagggggccggtcag
gccgtccagctgttagacgactaccacctggtcagagaggatgtggacagcctcatggag
atcagcctctggggggggcagcctgacccctacgctaaactagaccccaaggtgaaatca
gcgttcacgagggcctataaccgggagacccacctgacaccgtactccctccaaccaatc
aagaagggccgtcgtggcgggggggtggaggcagaaccgggaggagaggggcaagaggaa
cagcctgaggaagaggaggaggaggaaggtgttgcagctgacgccatgatcaaattgaag
aagaccaaaccctccaaggagcccaagaaggagaagacaacagccggggattctgggaag
ggaaagggcaaaggcaagggcaaagccaggaagtga
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integrated database retrieval system
