KEGG   Oncorhynchus kisutch (coho salmon): 116366023
Entry
116366023         CDS       T09179                                 
Name
(RefSeq) DENN domain-containing protein 3-like isoform X1
  KO
K20162  DENN domain-containing protein 3
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    116366023
Membrane trafficking [BR:oki04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    116366023
SSDB
Motif
Pfam: DENN WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 WDR55 Beta-prop_EML_2 WD40 WD40_2 Beta-prop_WDR75_1st Beta-prop_LRRK2 dDENN DUF5074 Beta-prop_Vps41 Beta-prop_EML EIF3I uDENN Beta-prop_TEP1_2nd Beta-prop_HPS5 SPA WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 116366023
NCBI-ProteinID: XP_031674185
Ensembl: ENSOKIG00005037870
LinkDB
Position
Unknown
AA seq 1272 aa
MADHLPSGLLEACVVVGASGDKLKDVYQSLQQGNSTTDLLILDPEVLQVHVPPFVTKENA
DESGVPRTFSRVQCRRSFIKKKERLVVAPSGPGGAGSSEGATVTEDVSVPKDIDLMALPQ
LCFPGRGGLQVTNEPKEERFHFLVFTDVFGNQTHGVVVQCCRPFQEGSVFYQNGHWSSTR
TTKLYTAFAICVISKHPYYNALKDCLSCLLVQLRTCRLSEERVKEFAAKLSLVPIPPPGQ
LHVVFNLRPLMIVLPSREDKEHPAVDLDLHLPFLCFRSKQILQIITGILMEQRVVFFSAD
WARLTLVAECFMFYIHPLHWQHPYVPILSAQMLDFIMAPTAFLMGCHLNHFEEVAAETDD
LILINIDDGTVSSSCSETVDLPDVPFVSAECFTKRRKGLQLQYDLEVCHQGAGTDVNEMR
MLRRQWQQNLNWEIQKVTLELIVNMFRDVSGHLNYEHRVFNSEEFLKTRELADLPFYRKV
LETHIFHSFLKDRLNRKMDAFTRMEVNTRSETQKMKAMTDNPRRPTMQEMARKYSSNPEI
RLNKRLGMSLPNLGEERHLNLLRQTSLKKTIIPESAFKIPPKPVKIFKLTEFPPPMVHHH
VQNYYGELIILLGKAISCVPPEDSTLLARYFYLRGFMNTLCSKRLDALSDFQNLYKTDIE
IFPTDLVKALVDSLQKDEFSQVDRWPELKRLIFKVKTDNEMVLVQADDHVKKFQLPKTHM
LQEDFVKRIQESGIVKDVATIHRLFEALTVGQQKQIDPEVFRVFYTFWKETEVEAQDVHL
PAEVMEHLDNNECVYKLSCSVKTNQGVGKIAMTQKRLFLLTDGRPGFIEITKFRDIKEVK
ISFAPFLLLRIPSLKIKCSLRKEVFEANLKSACDLWNLMVREMWAGRTMADDHKDPQYMQ
QALTNVLLMDAVVGCLQTQKAIFAASKLAYFDRVKHEAVPVMVPKTTLETLKHKINPSLD
LPAPQTVHVLLYTPGQLSYSEADGDGNPKLWCALSGGRVVVFDAASWSMQQNCVQVGSSQ
LNCMLGLDQDQVWIGSQDSIIYIIDTRSMSCNKQLTEHRHEVMDFALEESDKMRQTYSCS
ADGTVILWDLSTLKVKKQFQLTCDRLMSIQLFNGTLWCCARDGIVELRKNGTPHRKMTLP
EDLRSMSTEFSSLILFLERGQLWTSCSDSDELCLWHCKDLTKPFLRVRLQNCTGVNCMIK
VKNQIWVGCSGPSPDQCRMSGKIYIVDTESHSVEKELMAHTDSVQALCSAEGRYVLSGSA
CQDGKIAIWKVE
NT seq 3819 nt   +upstreamnt  +downstreamnt
atggcagaccatcttccctcagggctactggaagcgtgtgttgttgtcggagcctctggg
gataaactcaaggatgtctaccagtctctacagcagggcaacagcacaacagacctcctt
attttagacccagaggtcttgcaagtccacgtacctccgtttgtgaccaaagagaatgca
gatgagtctggtgtccccagaaccttcagtcgagtccagtgcagacggtccttcatcaag
aagaaggagaggctagtggtggctcctagtggccctggaggggccgggagcagtgagggg
gccactgtcacggaggatgtcagcgtccccaaggacattgacctcatggccctgccccaa
ctctgctttccaggtagaggggggcttcaagtaacaaatgaaccaaaagaagagcgtttt
cactttctagtcttcacggatgtgttcggtaaccaaacccatggagtggttgttcagtgt
tgtagaccatttcaggaagggtcagtattctatcagaatggacactggtcgtccaccagg
accactaagctctacactgcttttgccatctgtgtcatatccaagcatccttattacaat
gctctgaaggactgtctgtcttgcttgctggtgcagcttagaacatgcaggttgtctgaa
gagagggtgaaggaatttgcagccaaactgtctctagtgcccattccaccccctggacaa
ctacatgtggtgttcaacctgagacccctgatgatcgtactgccttccagagaggataag
gaacaccccgctgtagacctggacctccatttgcccttcctgtgctttagatccaaacag
attttacagatcatcactggtattctgatggagcagagggtagtgttcttctcagctgac
tgggcccgcctcaccctggtggcagagtgtttcatgttctacatccaccccctccactgg
cagcacccctacgtgcccatcctctcagcccagatgctggacttcatcatggcccccacc
gccttcctcatgggctgccacctcaaccactttgaggaggtcgctgcggaaacagacgac
ctgatcttgattaatattgatgatggaacagtgtcttcttcctgctcagagactgtcgac
ctaccagatgtccccttcgtttcggcagagtgttttaccaagcggaggaagggcctccag
ctacaatatgatctagaggtgtgtcaccaaggggccggcacagacgttaatgagatgcgc
atgctgaggagacaatggcagcagaacctgaactgggaaatacagaaggttaccttggag
ctcattgtcaacatgttcagggatgtcagtggtcacctgaactatgaacaccgagtgttt
aacagtgaagagttcctgaagaccagagagctagctgaccttcccttttacagaaaggtc
ttggagacacacatttttcattcattcctgaaggaccgcctcaataggaagatggatgct
ttcacacgcatggaagtcaacactcgctcagagacacagaaaatgaaggcgatgacagac
aaccccaggaggcccaccatgcaggaaatggccaggaagtatagcagcaacccagagatc
cgtctgaacaagaggctggggatgagcctccccaacctgggagaggagcgccatctcaac
ctcctcagacaaacctccctcaagaagaccattatccctgaaagtgccttcaagatcccg
cccaagcctgtgaagatcttcaagctgacagaatttcctcctcccatggtgcaccaccat
gtccagaactactatggagagttgatcatactactggggaaggccatctcctgtgttcct
cctgaggactccaccctcctggccaggtacttctacctgcgtggcttcatgaacacgctg
tgttccaagcgtcttgacgccctcagcgacttccagaacctctacaagacggacatcgag
atcttccccaccgacctggtaaaggcgctagtggactcgctgcagaaggacgagttctcc
caggtggaccggtggccagagctcaagcggctcatcttcaaggtgaagacagacaacgag
atggtgctggtccaagctgacgaccatgtgaagaagttccagctccctaagacccacatg
ctgcaggaggactttgtgaagcgcatccaggagtctgggattgtgaaagacgtcgccacc
atccataggctgtttgaggctctcactgtggggcaacagaagcagattgacccagaggtg
ttccgtgtgttctacaccttctggaaggagacggaggtggaggcccaggatgttcacctg
ccagctgaggtcatggagcacctggacaacaacgagtgtgtctacaagctgtcctgctcc
gtcaaaaccaaccagggagtgggtaagatcgccatgacacagaagaggctcttcctgctc
actgacgggaggcctgggtttatcgagatcaccaagttcagagacataaaggaggtgaaa
atctcctttgctcctttcctgctgctgaggatcccgtctctgaagatcaagtgcagtctg
aggaaggaggtgtttgaggccaacctgaagtctgcgtgtgacctgtggaatctcatggtc
agagagatgtgggctgggaggacgatggcagacgaccacaaggatcctcagtacatgcag
caggctttgactaacgtcttgctcatggatgctgtggttggctgccttcagacccagaaa
gccatatttgccgcctccaaactggcatactttgacagagtgaaacatgaagcagttcct
gtgatggttccaaagacaacattggagacgttgaaacacaagatcaatccatcactagac
ctcccagccccacagactgtacatgtcttactctacacaccaggccagttgagttactcg
gaggcagacggagatgggaaccccaagctgtggtgtgccctcagtggtgggagggtggtt
gtgtttgatgcagccagctggtccatgcagcagaactgtgttcaagtgggatcctcccaa
ctgaactgcatgctgggattggaccaggatcaagtatggattggctcccaggattccatc
atttacataattgacactcgcagcatgtcctgcaataagcagctgacagagcacaggcat
gaggttatggactttgccctggaggagagtgacaagatgagacaaacatactcctgtagt
gccgatggaacagtcattctgtgggacctctcaacgctaaaagtgaaaaagcagtttcaa
ctgacctgtgataggcttatgtccattcagctcttcaatggaacactgtggtgctgtgcc
agagacggcatcgttgaactgaggaagaacggaaccccacatcgtaagatgacacttcct
gaggatctacggagcatgtccactgagttcagcagcctcatcctcttcttagagaggggc
cagttgtggacgagctgttctgattctgacgagctctgtctctggcactgtaaagacctg
acgaagcctttcctgagggtgcggctacagaattgtacaggggtcaactgtatgatcaag
gttaagaatcagatctgggttggctgcagcgggccgagccctgaccagtgcaggatgagt
gggaagatctacatagtggacacagagagccacagtgtagagaaggagctgatggcccac
acagacagtgtccaggcactgtgctctgcagagggccgctatgtactcagtggctccgcc
tgccaggatggcaaaatcgccatttggaaggttgagtag

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