Oncorhynchus kisutch (coho salmon): 116366453
Help
Entry
116366453 CDS
T09179
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116366453
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oki04030
]
116366453
G protein-coupled receptors [BR:
oki04030
]
Frizzled / Smoothened family
116366453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
116366453
NCBI-ProteinID:
XP_031674407
Ensembl:
ENSOKIG00005038468
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MSSRGWSSIVGGLGMLCVWAASFLVTHAVTVQRNETIFNDFCKKTTTCEVLKYNTCLGSP
LPYTHTSLALAEDSSTQDEAFEKLAMWSGLRNAPRCWAVIQPLLCAVYMPKCDNGQVELP
SQHLCQATRRPCSIVDQERGWPNFLKCEETDKYPMGCTNEVQKLKFNTSGHCEAPLVKTD
VQASWYKDVEGCGIQCNNPLFTDEEHSDMHAYIAVFGTVTLLCTFFTLATFLADWKNSNR
YPAVILFYINTCFFMGSIGWLAQFMDGARKEIVCKSDNTMRLGEPSSTETLSCVIIFSLV
YYSLMSGVIWFVMLTYAWHTSFKALGTTHQPLSGKTSYFHMVTWSVPFILTVAILATAEV
DGDSVSGICFVGYKNYHYRAGFVLAPIGVVLVIGGYFLIRGVMTLFSIKSNHPGLLSEKA
ASKINETMLRLGIFGFLAFGFVLITFGCHFYDFFNQAEWEKSFREYVLCEANVTIAHQTN
KPIPECTIKNRPSLLVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWCKVIGRSDDEPK
RIKKSKMIAKAFSKRKELHKDPEKELSFSMHTVSHDGPVAGINFDLNGEPSNEMSSAWAQ
HVTKMVARRGAILPQDISVTPTGTPVPPPEERNKLWMVEAEISPEMMKRKKKRKKRKKEA
RPLEELAEHQGYRQREFGTSSVPRLPKLPGHRSLVANLRQHQEAEDVLPGSYPEFRPSHP
LPYQERYGGALGASSSQRSRYPDLNPLSLSDLPEDLGLGPRCRPQPPPLSFWQPNGAIHY
SGEVAPMAGLSGRTDHVGRSQGGQRRAEWGQIHSRTNLMEAELMDADSDF
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccgtggatggagttccattgttggtgggttggggatgctttgcgtttgggct
gcctcctttctggttactcatgcggtaacggtacaaagaaacgaaaccattttcaatgat
ttctgcaagaaaactacaacatgtgaagtgcttaaatataatacatgtcttgggtcccca
ctaccgtacacgcacacgtctcttgccttggctgaagactcaagtacccaagacgaagca
tttgagaagttggccatgtggtctggtctgaggaacgcccctcgctgctgggcggtcatc
cagcccctgctgtgtgccgtctacatgcccaagtgtgacaacgggcaggtggagcttccc
agccagcacctgtgccaggctacgcgtcgcccctgcagcatcgtggaccaggagaggggc
tggcccaacttcctcaagtgtgaggagacggacaagtaccccatgggctgcacgaacgag
gtgcagaagctgaagttcaacacatcgggacactgcgaagcccccctggtgaagacagat
gttcaggccagctggtacaaagatgtggagggctgcggcattcagtgtaacaaccccctg
ttcaccgacgaggagcactcggacatgcacgcctacatcgctgtgttcggcaccgtcacc
ctgctctgcacctttttcactctggccacctttctggcggactggaagaattcaaaccgt
taccccgccgtcatcctcttctacatcaatacctgtttcttcatgggcagtatcggctgg
ctggctcagttcatggatggagctcgcaaagagatcgtatgtaagagtgacaacaccatg
cgtttaggggagccctcgtccaccgagactctgtcgtgtgtcatcatcttcagcctcgtc
tactactccctgatgtctggggtgatctggtttgtcatgctgacctacgcctggcacacg
tccttcaaggccctgggcaccacccaccagcccttgtcgggcaagacctcatacttccac
atggtcacatggtccgtccccttcatcctcactgtggctattctagccaccgctgaggtg
gacggagactctgtcagtgggatctgtttcgtgggctataagaactaccactaccgtgct
ggctttgtgttggctcccattggagttgtgcttgtcattggtggctatttcctcatacga
ggagtcatgacgttgttctccatcaagagtaaccacccgggtcttctgagtgagaaggca
gcgagcaaaatcaacgaaacaatgctaagacttggtatatttgggttcctggcgtttggc
tttgtattaatcacgtttggctgccacttctatgacttcttcaaccaggctgagtgggag
aagagcttcagagaatatgtgttgtgcgaggccaatgtgacgatcgctcatcagaccaac
aagccgatcccagaatgtactatcaagaaccgtcccagtctactggtggaaaagattaat
ctgttctctatgttcggcacgggcatcgccatgagcacctgggtgtggaccaaggccact
atcctcatctggaaacgcacctggtgcaaggttatcggccgtagcgacgatgagcccaag
aggataaagaagagcaagatgatagccaaggccttctctaagcgcaaggagctccacaaa
gacccggagaaggagctgtccttcagcatgcacactgtctctcatgacgggccagtagct
ggcatcaactttgacctgaacggggagccatccaacgagatgtcttcagcctgggcccag
catgtgaccaagatggtggccaggaggggcgccattctaccgcaggacatctctgtcacc
cctacagggacacctgttccaccgccagaggagaggaacaagctgtggatggtggaggcg
gagatctcccctgagatgatgaagaggaagaagaagaggaagaagaggaagaaggaggcg
cgtcctctggaggagctggccgaacaccagggctaccgtcagcgagagtttggcaccagc
tcggtgccccggctacccaagctgcccggccacaggagcctggtggccaatctgaggcag
caccaggaggctgaggacgtccttccaggctcttaccctgagtttaggccctctcatccc
ctgccctaccaggagaggtacggaggagccctgggggcctcctctagccagaggagcagg
taccctgacctcaaccccctctccctcagcgacctgccagaggacctcggcctggggcct
cgctgccgcccccaaccaccacccctctccttctggcagcccaatggagcgatccactac
tccggggaggtggcgcctatggcagggctgtctgggaggacagaccacgtggggaggtcg
caggggggtcaaaggagggctgagtgggggcagatccactctagaaccaacctgatggag
gcggagcttatggatgctgactctgacttctga
DBGET
integrated database retrieval system