Oncorhynchus kisutch (coho salmon): 116366743
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Entry
116366743 CDS
T09179
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116366743
09123 Folding, sorting and degradation
03018 RNA degradation
116366743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
116366743
03041 Spliceosome [BR:
oki03041
]
116366743
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116366743
mRNA degradation factors
5'-3' decay
Lsm complex
116366743
Spliceosome [BR:
oki03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
116366743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
116366743
NCBI-ProteinID:
XP_031674575
Ensembl:
ENSOKIG00005031601
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEDTDSSLDLGNIRAEPLNSIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgccctcgagagctacatcaaccgtacagtggccatcgttacatctgacgga
cggatgatagtgggcaccctgaagggctttgaccagaccatcaacctgattctggatgag
agtcatgagcgtgtgttcagttcctctcagggtgtggagcaggtggtcctgggactatac
atcgtcagaggagacaacgtagctgtgattggggagattgacgaggacacagattcttcg
ctggacctggggaacatccgcgctgaaccccttaactctatagtccactga
DBGET
integrated database retrieval system
