Oncorhynchus kisutch (coho salmon): 116368012
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Entry
116368012 CDS
T09179
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
116368012
Membrane trafficking [BR:
oki04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116368012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
Ig_2
LRR_9
ig
LRR_Zer-1
LRR_EndoS
Ig_C17orf99
LRR_RPS2
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
116368012
NCBI-ProteinID:
XP_031674923
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MVSGEAGGHSYLVACWQPILVLMLGTVLSGSTTGCPSRCECNAQERSVVCHRRRLASFPE
GIPIETKLLDLSKNRLKSLGPEEFINYPQLEELQLNENNISSMEPGAFSNLVGLRTLGLR
NNQLKLIQLGVFTGLSNLTQLDISENRIVILLDYMFQELYNLKALEVGDNNLVFISHRAF
HGLSSLEQLTMERCNLTSVPTEALSHLHNLLSLRLRHLTVNAVRDYSFKRLERLRVLEIS
YWPYLDTMTSKCLYGLNITSLTITNCNLTAIPYQAIRHLGHLLFLNLSFNPIHTVEGNKL
HNLMRLQAFHLVGGRLATIEPYSFRGLNHLRVLNVSSNSLSTLEESAFHSVGNLETLALY
GNPLACDCRLLWVFRRRWRLNFNRQQPSCSLPEAVQGKEFKDFPDILPSNSFTCQKSRIQ
DHKALQRHVDEGTTVHYTCQADGDPAPVIMWLSPKKQFITTKSVGRLSVSPEGTLEVRYA
QIQDNGTYLCIASNAAGNDTKPAHLHVHSYSPNWPHQPNKTFAFISNQPSEDGANGTLAQ
VPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKGNVKPNIEIEYVPRKAEAGES
SPTGDAPRKFNMKMM
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccggggaggcaggtgggcacagttacctggtggcgtgctggcagcccatcctg
gtcctaatgctgggcactgtcctctccggctccaccaccggctgcccgtcccgctgtgag
tgtaatgctcaggaacgttccgtggtgtgccatcgacggaggctggcctcgtttcccgag
ggcatccccatcgagacaaaactactggacctcagcaagaaccgtctgaaaagcctgggg
cctgaggagttcatcaactacccacagctggaggagctgcagctcaatgagaacaatatc
tcttccatggagcccggggcttttagcaaccttgtcggcttgcggactctggggctgcgc
aacaaccagcttaagctaatccagttgggagtgttcacaggcctcagcaacctcacccag
ctggatattagcgagaacagaattgtcatcctgctggactacatgttccaggagctgtac
aacctgaaggctctggaagtcggcgataacaacctggtgttcatctctcaccgagcgttc
catggcctcagcagcctggaacagctgaccatggagcgctgcaacctgacgtcggtgccc
actgaggccctgagccatctgcacaacctgctgtcgctgcgactacgccacctcaccgtc
aatgccgtcagggattactccttcaagaggctggaacgcctgagggtgttagagatctcc
tactggccctacctggacactatgacttccaaatgcctgtacggcctcaacatcacctcc
ctgaccatcacaaactgtaacctcaccgccatcccttaccaggccatccgacaccttggg
caccttctctttctcaacttgtcttttaatcccattcacacggtggaggggaacaagctg
cacaatctaatgaggctccaggccttccacttggtaggagggagattagccacaatcgag
ccctactccttccggggcttgaaccatctccgagtcctcaacgtatccagcaatagcctg
agcaccctggaggaatccgcctttcactccgtggggaacctggagaccctggcactgtac
gggaacccactggcctgcgactgccgactgctctgggtcttccgtcgccgctggaggctc
aacttcaaccggcagcagccctcctgctctttgcccgaggccgtgcagggcaaggagttc
aaagacttccccgacatcctcccctccaattccttcacctgccagaagtccaggatacaa
gaccacaaggcactgcagaggcacgtagacgagggcacaacggtccattacacatgccag
gccgacggcgacccagcccccgtgatcatgtggctgtcccccaagaagcagttcatcacc
accaagtccgtggggcgtctcagcgtgtcccccgagggcacgctagaggtgcgctacgcc
cagatccaggacaacggtacctacctgtgcatcgccagcaatgccgcagggaatgacacc
aagcctgcccacctgcatgtgcacagctactcgcccaactggccgcaccagcccaacaag
acgtttgctttcatctccaaccagcccagcgaggacggggccaacgggaccctggcccag
gttcccttcccattcgacgtgaagactctgatcatcgccaccaccatgggatttatctcg
ttcctcggcgtcgtcctcttctgtctcgtcatcctcttcctctggagcagaggaaaaggc
aacgtcaagccaaacatagagattgagtatgtaccgcgtaaggcggaggcaggtgagagt
agtccaaccggcgatgcgccacgtaaattcaacatgaaaatgatgtga
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