Oncorhynchus kisutch (coho salmon): 116370645
Help
Entry
116370645 CDS
T09179
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oki04054
]
116370645
Pattern recognition receptors [BR:
oki04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116370645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
PYRIN
DeaD_C
Motif
Other DBs
NCBI-GeneID:
116370645
NCBI-ProteinID:
XP_031675703
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MSLSGEREEGGPASKMSLSGEREEGGPASKMHLSGGHDTKTKRPVKQERPASPVPSCVSM
KSDWSMEQPIVFREGDFSTEQRNQQGRSESEILSGQSSQSHQTDLASIFSLLEEKIMTFV
KNELKMFKRILSPELPEGFESQKQDKESSAREGALKITLHILRKMNQKELADTLEKYDLA
VICQRELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELYITEGGTGEVNNEHELRQIETT
TRKQARPETAIKCNDIFKPLTGQDKPIRTVLTKGVAGIGKTVSVQKFILDWAEGKANQDV
QFVFSFPFRELNLMKEDKHTFIELLNHFSMETKQSRISNYDKYNILFIFDGLDECRLPLD
FQKNKICWDVTESTSVDVLLTNLIKGNLLPSALLWITTRPAAANKIPSGCVDQVTEVRGF
NDPQKEEYFRKRFRDGDLASRIISHIKTSRSLHIMCHIPVFCWISATVLEHMLKQKREEM
PKTLTEMYTHLVVFHTKQKNEKYLGKEETGPHWNKESILSLGKLAFQQLVTGNLIFYEED
LKESGIDVNEASVYSGLCTQLFKEECVLYQDKVYCFVHLSIQEFLAAVYVFLSFINNNEN
LMSEQQSTSRNLSALFRDKPKCAVYKSAVDKALQSETGNLDLFLRFLLGLSLESNQKHLR
GLLTKTRSSSQSHEETVKYIKEKIRENPSPERSINLFHCLNELNDHSLVEEVQSYLSSGS
LSEPNLSPDQWSALVFVLLTSEKELDVFDLKKYSRSEEGLLRLLPVVKASRAVLLSGCGV
TEEGCASLVSALESNPSHLRELDLSNNDLKDSGVKLLSAGLRNPHCKLETLRLSGCLVTE
EGCASLVSALRSNPSHLRELDLSYNHPGDSGVRLLSAGLEDPHCRLEKLNVEHGGENRMK
PGLRKYVCDLTLDPNTVDRHLSLSEENRKVTCRTEEQPYPDHPERFEVWGQVLCREGLTG
RCYWEVEWSGGRAVIGVTYKGINRRGGADCCLGFNDKSWTLFCSDNRYYARHNNKPTTID
VPSSSSHRVGVYLDWPAGTLSFYRASSDTLTHLITFTSTFTEPLYPGFWVCDDGDSVSLK
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctctggggagagagaggaggggggccctgcctctaaaatgagtctctctggg
gagagagaggaggggggccctgcctctaaaatgcatctctctgggggacatgacaccaaa
actaagagaccagtcaagcaggagagaccagcctcccctgttcccagctgtgtgtccatg
aagagtgactggtctatggaacaacctatagtgtttagagagggagacttttctactgaa
caaagaaaccaacaggggagatcagagtcagagattctcagtggtcagtcttcccagagt
catcaaacagacctggcctccatattcagtttgcttgaagagaaaattatgacatttgtg
aagaacgagctgaagatgttcaagaggattcttagtccagaactcccagaaggctttgag
agtcagaagcaggataaggaaagcagtgccagagagggggctctgaagatcacactgcac
atcctgaggaaaatgaaccagaaggagcttgctgacacactggagaaatatgatcttgct
gtgatttgccaacgtgaactcaaatctaatctaaagaagaagtttcaatgtgtatttgag
gggatcgctaaacaaggaaacccaacacttctcaataagatctacacagagctctacatc
acagagggtggaacaggagaggtcaataatgaacatgagctgagacagattgagacaaca
accaggaaacaagcaagaccagagactgcaatcaaatgtaatgatatcttcaaaccctta
actggacaagacaaacctatcagaactgtgctgacaaagggagtcgctggcattggaaaa
acagtctctgtgcagaagttcattctggactgggctgaaggaaaagcaaatcaggatgtc
caatttgtattttcattcccttttcgggagctgaatttgatgaaagaggacaaacacact
ttcattgaacttcttaatcacttctcaatggaaaccaaacaatcaagaatctccaactac
gacaagtacaacattctgttcatctttgatggtctggatgagtgccgactgcccctagac
ttccagaagaacaagatctgttgggacgtcacagagtcaacctcagtggatgttctgctg
acaaatctcatcaagggaaatctgcttccctctgctctcctctggataactacccgacct
gcagcagccaataagatcccttctgggtgtgttgaccaggtgacagaggtacgagggttc
aatgacccacagaaggaggagtacttcaggaagagattcagggatggggacctggccagc
agaatcatctcacacataaagacatcaaggagcctccacatcatgtgccacattccagtc
ttctgttggatttctgcaacagtccttgaacacatgctgaaacagaagagagaagagatg
cccaagactctgactgagatgtacacacaccttgtggtgtttcataccaaacagaagaat
gaaaagtatcttgggaaagaagagacaggtccacactggaataaagagagcattctgtca
ctgggaaaactggcttttcaacagcttgtgactggcaatctgattttctatgaagaagac
ctgaaagagtctggcattgatgtcaatgaagcctcagtgtactcaggattgtgcacacag
ctctttaaagaggaatgtgtgctgtaccaggacaaggtgtactgctttgttcatctgagc
attcaggagtttctggctgctgtatatgtgttcctctcattcatcaacaacaatgagaat
ctaatgtccgaacaacaatcaacgtccaggaacctttctgcgctgttcagagacaagcca
aaatgcgctgtctacaagagtgctgtggataaagccttacaaagtgagacaggaaaccta
gaccttttcctccgcttccttctgggcctctcactggagtccaatcagaaacacttacga
ggtctactgacaaagacaagaagcagctcacagagccatgaagaaacagtcaagtacatc
aaggagaagatcagggagaatccctctccagagaggagcatcaatcttttccactgtctg
aatgaactgaatgaccattctctagtggaggaggtccaaagctacctgagctcaggaagt
ctctcagaacccaacctgtcacctgatcagtggtcagctctggtctttgtgttgctgact
tcagaaaaggagctggatgtgtttgacctgaagaaatactccagatcagaggaaggtctt
ctgaggctgctgccagtggtcaaagcctccagagctgttctgctgtcaggctgtggagtc
acagaggaaggctgtgcttctctggtctcagctctggagtcaaacccctcacacctgaga
gagctggacctgagtaacaacgacctgaaggattcaggagtgaagctgctctctgctggt
ctgaggaatccccactgtaaactggagactctgaggctgtcaggctgtctagtcacagag
gaaggctgtgcttctctggtctcagctctgaggtcaaacccctcacacctgagagagctg
gacctgagctacaatcacccaggagactcaggagtcagactgctctctgctggactggag
gatccacactgcagactggagaaactcaatgtggaacatggtggagagaacagaatgaaa
cctggacttagaaaatatgtctgtgatctcacactggacccaaacacagtagacagacac
ctctctctgtctgaggagaacagaaaggtgacatgtaggacagaggagcagccgtatcct
gatcacccagagagatttgaggtctggggacaggtgctgtgtagagagggtctgactggg
cgctgttactgggaggtagagtggagtgggggaagggctgttataggagtgacatataaa
ggaatcaacaggagaggaggtgctgactgttgtcttggattcaatgacaagtcctggact
ctgttctgctctgacaaccgttactatgccaggcacaataataaacccactaccatagac
gtcccctcctccagctcccacagagtaggagtgtatctggactggccagccggcactctg
tccttctatagagcctcctctgacacactgacccacctgatcacattcacctccacattc
actgagcccctctatccagggttttgggtttgtgatgatggtgactcagtgtccctaaaa
taa
DBGET
integrated database retrieval system
