Oncorhynchus kisutch (coho salmon): 116371034
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Entry
116371034 CDS
T09179
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A-like isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
oki04517
IgSF CAM signaling
oki04530
Tight junction
oki04810
Regulation of actin cytoskeleton
oki05100
Bacterial invasion of epithelial cells
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116371034
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116371034
09144 Cellular community - eukaryotes
04530 Tight junction
116371034
09142 Cell motility
04810 Regulation of actin cytoskeleton
116371034
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116371034
05100 Bacterial invasion of epithelial cells
116371034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
116371034
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
116371034
Membrane trafficking [BR:
oki04131
]
Others
Actin-binding proteins
Arp2/3 complex
116371034
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
116371034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_Aladin
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Rax2
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
116371034
NCBI-ProteinID:
XP_031675820
Ensembl:
ENSOKIG00005025104
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MSLYSFGLEPLSCHAWNKDRTQIAVSPNSSVAIIYEKKGNEWAKIHELTEHSGRITGIDW
APDSNRIVTCASDRNAYVWTLKDKVWKPTLVLVRINRAATFVKWSPLENKFALGSGARLI
SVCYFEKENDWWLSKHIKKSIRSTVMCLDWHPNNILLAAGSSDFHCRIFSAYIKEIEDKP
GPTAWGAKMPFGEMLLETKDCGGWVHSVSFSPSGDHLAWVAHNSSISVADATQGKEVTQL
TTDRLPLLSVLYVSPTEMVAAGHDCCPFQFSYKGPGSLKFVKKLDIPKQTSRGSMSAMQH
FRNLDKKATDDDESNELGCLHQNSITQLCIVSGTKAHVDKYSSVGLDGAMVLWDFKH
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtacagctttgggttggagcctctctcctgtcatgcctggaataaggacagg
acacagattgctgtcagccccaacagcagtgtggcgatcatctatgagaagaaggggaac
gagtgggccaagatccacgagctgactgagcacagtggacgaatcacaggcatcgactgg
gctccggattcgaaccgcatcgtgacgtgtgcatcggaccgtaatgcgtacgtgtggacc
ctgaaggacaaggtgtggaagcccactctggtgttggtgaggatcaaccgggctgctact
ttcgtcaagtggtcccctctggagaataagtttgccctgggcagtggagctcgcctcatc
tctgtctgctacttcgagaaggagaacgactggtggctcagtaagcacataaagaagagc
atccggtccacggtgatgtgtctggactggcaccccaacaacatcctgttggctgcagga
tcctctgacttccactgcaggatcttctctgcctacatcaaggaaatcgaggacaagcca
ggcccgacagcttggggggctaagatgccatttggggagatgctgctggagaccaaggac
tgtggaggttgggtacacagtgtctccttctcccccagcggagaccacctggcctgggtt
gctcacaacagcagcatcagtgtggccgacgccacccaggggaaagaggtgactcagctg
acaacggaccgcctccctctactgagcgtgctctatgtgagccccacagagatggttgcc
gcgggccatgactgctgtccgtttcagttctcctataagggcccaggcagtctgaagttt
gttaagaagctggacatccccaagcagacctctaggggcagcatgtccgccatgcaacac
ttccgcaatctggataagaaggctactgacgacgacgagagcaacgagctgggctgcctg
caccagaacagcatcactcagctgtgtatcgtgtcaggaactaaggcccacgtggacaag
tacagcagtgtgggtctggacggagctatggtcctctgggacttcaagcactga
DBGET
integrated database retrieval system
