Oncorhynchus kisutch (coho salmon): 116371563
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Entry
116371563 CDS
T09179
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00260
Glycine, serine and threonine metabolism
oki00630
Glyoxylate and dicarboxylate metabolism
oki00670
One carbon pool by folate
oki01100
Metabolic pathways
oki01200
Carbon metabolism
oki01230
Biosynthesis of amino acids
oki01240
Biosynthesis of cofactors
oki04981
Folate transport and metabolism
Module
oki_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
116371563 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116371563 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
116371563 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
116371563 (shmt1)
Enzymes [BR:
oki01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
116371563 (shmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
116371563
NCBI-ProteinID:
XP_031676278
Ensembl:
ENSOKIG00005043180
UniProt:
A0A8C7K7K8
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MSHSNGTSHHVSKDVWESHNKMMQEPLSSNDSEVFSIIKREKHRQTFGLELIASENFTSR
AVLEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQRRALEAYGLDADKWGVNVQPYS
GSPANFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVDPDTG
LINYDRLEENARLFHPRLIIAGTSCYSRNLDYARLRRIADENGAFLLADMAHISGLVAAG
VVPSPFEYCDVVSTTTHKTLRGCRSGVIFYRKGIRSVDPKGKETLYNLESLINQAVFPGL
QGGPHNHAIAGVAVALKQALTPEFKAYQYQVLSNCRAMANALINHGYKIVTGGSDNHLIL
LDLRPNGTDGGRAEKVLEAAAIACNKNTCPGDKSALRPSGLRFGSPALTSRGMVEDDFRK
VAEFIHRGIQVTLDIQASLQPKATLKEFKEALAGEGKHQERVAELRGEVEAFAGGFPMPG
LEEL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatagcaacggtaccagtcaccatgtcagtaaggacgtgtgggagtctcacaac
aagatgatgcaggagccactcagctccaacgactctgaggtgttctccatcatcaagaga
gagaagcaccgtcagacctttggcctggagctgatcgcatcagagaacttcacctccaga
gctgttctagaagccctgggctcctgtatgaacaacaagtactcagaggggtatcctgga
cagaggtactacggcggtacagaacatgttgatgagttggagcgtctgtgtcagaggaga
gctctggaggcctacggactggacgctgacaagtggggagttaacgtacagccatactca
ggctcccctgctaactttgctgtgtacacggcgatcgtggagcctcatgggaggatcatg
ggtctggacctccctgatggaggtcacctgacgcacggcttcatgacggacaagaagaag
atctctgccacatccatcttctttgagtccatgccatacaaggtggatccagacactggt
ctcatcaactacgaccgactggaggagaacgcccggctgttccaccctagactgatcatc
gcaggtaccagctgttattcccgtaaccttgactacgctcggctgcgtcgtatcgcagat
gagaacggagctttcctattggccgacatggcacacatcagcggactggtggcggccggg
gtcgtcccgtctccgttcgagtactgtgacgtggtctccacgacgacccacaagacgctg
cggggctgtcgctctggggtcatcttctacagaaagggaatacgtagtgtggaccctaag
ggaaaggagactctgtataatctggagtctctcatcaaccaggcagtattcccaggacta
cagggaggaccccacaaccacgccatcgcaggtgtggcggtggccctgaagcaggctctg
accccagagtttaaggcgtatcagtaccaggtgctctctaactgcagagctatggccaac
gccctcatcaaccacgggtacaagatcgtcaccgggggttctgataaccatctgatctta
ctggacctgaggcccaacgggacggacggaggacgagctgagaaggttctagaagctgct
gccatcgcctgcaacaagaacacctgtccaggtgataagagtgcgttgcgtcccagcggt
ctgaggttcggctctcctgctctgacctccagaggaatggttgaagacgacttcaggaag
gtcgcagagttcatccacagaggtatccaggtgaccctggacatccaggcctctctgcag
cccaaggcgaccctgaaggagtttaaggaggccctggcaggggaggggaagcaccaggag
agggtagcagagctgaggggggaggtggaggctttcgctggggggttccccatgcctggt
ctggaggaactttaa
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