Oncorhynchus kisutch (coho salmon): 116372103
Help
Entry
116372103 CDS
T09179
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
oki04517
IgSF CAM signaling
oki04530
Tight junction
oki04810
Regulation of actin cytoskeleton
oki05100
Bacterial invasion of epithelial cells
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116372103
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116372103
09144 Cellular community - eukaryotes
04530 Tight junction
116372103
09142 Cell motility
04810 Regulation of actin cytoskeleton
116372103
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116372103
05100 Bacterial invasion of epithelial cells
116372103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
116372103
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
116372103
Membrane trafficking [BR:
oki04131
]
Others
Actin-binding proteins
Arp2/3 complex
116372103
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
116372103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WDR55
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
PEP5_VPS11_N
EIF3I
WDR90_beta-prop_4th
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
116372103
NCBI-ProteinID:
XP_031677051
Ensembl:
ENSOKIG00005048917
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MAYHSFLLEPISCHSWNKDRTQIALCPNNHDVHIYKKDGTKWIKIHELKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWSLKGEVWKPTLVILRINRAARCVSWSPKENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTVWGSKMPFGEVLFESGPSGVSGGAGDGAGGGWVHGVCFSHSGNRLAWTSHDSTVAIA
EGGKTSTISSLSSETLPLLCVSFITENSLVAAGHDCYPVLFVYDGTKGSVTFGGKLDVPK
QTSQRGISARERFQNLDRRATSSETTEQGLESLHKNSISQISVLEGGKSKCSTFCTTGMD
GGMVTWDVKSLESALKDLKILFFCSQSLESALKDLEIV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccacagcttcttgctcgagccaatcagctgccactcctggaacaaggaccgg
acccagattgctctgtgtcccaacaaccatgatgtccacatctataagaaggacgggacc
aagtggatcaagattcatgaactgaaggagcacaacggacaggtcacaggtatagactgg
gctccagagagtaaccgtatcgtgacctgtgggacggatcgtaacgcgtatgtctggtct
ctgaagggggaggtgtggaagcccaccctggtcatcctccgtatcaaccgggctgctcgc
tgtgtcagctggtctcccaaggagaacaagttcgctgtgggcagcgggtcacgcctcata
tccatctgctactttgaacaggagaatgactggtgggtctgtaagcacatcaagaagccg
atccgttccaccgtcctcagtctggactggcatcctaacaacgtgctgctggcggctgga
tcctgtgacttcaaatgcagggtgttctcggcctacatcaaggaggtagaggagaagccc
ggacccacagtgtgggggtctaagatgccctttggagaggtgctgtttgagtccgggccc
tcaggggtgtctgggggggctggagatggggcaggagggggatgggtccacggggtctgt
ttctcccacagtgggaaccgccttgcctggacgtcacatgactcgactgtggcgatcgca
gagggaggcaagaccagcacgatcagcagtctgagctctgagacccttcctctgctgtgt
gtcagctttatcactgagaacagcctggtggccgctggtcatgactgctacccggtactg
tttgtgtatgacggtactaagggctcagtaacgttcggagggaagctggacgttcccaag
cagacgtctcagagagggatcagcgccagggaacgcttccagaacctggaccgccgagcc
acctcgtctgagaccaccgagcagggcctggagagtctgcacaagaacagcatcagtcag
atctctgtgctggagggagggaagagtaaatgttccacgttctgtaccactgggatggac
ggaggaatggtcacatgggacgtcaagagtctggagtctgccctgaaggatctcaagatc
ctcttcttctgttcccagagtctggagtctgccctgaaggatctcgagatagtctga
DBGET
integrated database retrieval system
