Oncorhynchus kisutch (coho salmon): 116372104
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Entry
116372104 CDS
T09179
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
oki04517
IgSF CAM signaling
oki04530
Tight junction
oki04810
Regulation of actin cytoskeleton
oki05100
Bacterial invasion of epithelial cells
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116372104
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116372104
09144 Cellular community - eukaryotes
04530 Tight junction
116372104
09142 Cell motility
04810 Regulation of actin cytoskeleton
116372104
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116372104
05100 Bacterial invasion of epithelial cells
116372104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
116372104
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
116372104
Membrane trafficking [BR:
oki04131
]
Others
Actin-binding proteins
Arp2/3 complex
116372104
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
116372104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR5
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_HPS5
Rax2
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
RMC1_N
Beta-prop_SPT8
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
116372104
NCBI-ProteinID:
XP_031677053
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYQKSGNQWVKSHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSLKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESDNDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSSSGNRLAWVSHDSTVTVVDGTKDPRDP
SQLKTEFLPLLSVLFISENSVVAAGHDCCPMLFRCDDGGSLTFVSKLDLPKASITRNISA
MERFRNMDKRATTEDRNTALETLHQNSITQVSIYEGDQSDCRKFCTTGIDGAMTIWDFKS
LEASIQGLRIM
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgcaccagtttctgcttgagcccatcacctgtcacgcctggaaccgggacaga
acccagatcgccatcagtcccaacaaccatgaggttcacatctatcagaagagcggtaac
cagtgggtgaagagtcatgagctgaaggagcacaatggacacatcacaggtatcgactgg
gctcctaagtccgaccgtatcgtgacgtgtggggcggatcgtaacgcctacgtctggtct
ctgaaggacggcgtctggaagcccacgctggtcatcctgaggatcaacagagctgcaacc
ttcgtcaagtggtctcctctggagaacaagttcgctgtgggcagcggagccagactcata
tcagtctgttacttcgagtctgataacgactggtgggtgagtaagcacatcaagaagccg
atccgttccaccgtcctcagtctggactggcatcctaacaacgtgctgctggcggctgga
tcctgtgacttcaaatgcagggtgttctctgcctacatcaaggaggtggaggagaagccc
ggccccaccccctgggggtccaagatgccgtttggggcggtgctggctgagtttgggggt
gccgggggaggaggatgggtccactctgtgtccttctcctcgtctggtaacagactggcc
tgggtctcacacgactccactgttactgtggtggacgggaccaaggatccacgtgatccg
tctcagttgaagactgagttcctccctctgctcagtgttctcttcatctctgagaacagc
gtggtggcagcgggtcatgactgttgtcccatgctgttccgttgtgatgacggagggtcc
ctgacgtttgtctctaagctggaccttcctaaagcctccatcactagaaacatctccgct
atggagcgtttcagaaacatggacaagagagcgaccacagaggaccgtaacacagccctg
gagacactgcaccagaactccatcactcaggtctctatctatgagggagaccagtctgac
tgtcgtaagttctgcaccacgggcatcgatggagccatgaccatctgggacttcaagagt
ctggaggcgtccatccaggggctgaggatcatgtga
DBGET
integrated database retrieval system
