Oncorhynchus kisutch (coho salmon): 116372501
Help
Entry
116372501 CDS
T09179
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oki04054
]
116372501
Pattern recognition receptors [BR:
oki04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116372501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
LRR_6
PYRIN
LRR_4
DUF7639
Motif
Other DBs
NCBI-GeneID:
116372501
NCBI-ProteinID:
XP_031677166
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MSLSGGREEGGPASKMSLSGEHDTKAKSPIKQERPASPVPSCVSMKSDKSMNLPIEFREG
DFSTEQRNQQERSESEILSGQSSQSHQTDLASIFSLLEEKIMTFVKNELKMFKRILSPEL
PEGFESQKQEVVDAEDEKQESSAREGALKITLHILRKMNQKELADTLEKYSDELAVICQR
ELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELYITEGGTGEVNNEHELRQIETTTRKQA
RPETAIKCNDIFKPLTGQDKPIRTVLTKGVAGIGKTVSVQKFILDWAEGKANQDVQFVFS
FPFRELNLMKEDKHTFIELLNHFSMETKQSGISIYNKYKVLFIFDGLDECRLPLDFQKNK
ICWDVTESTSVDVLLTNLIKGNLLPSALLWITTRPAAANKIPSGCVDQVTEVRGFNDPQK
EEYFRKRFSDEDLASRIISHIKTSRSLHIMCHIPVFCWISAIVLEHMLKHKREEMPKTLT
EMYTHLVEFHTKQKNEKYLGKEETGPHWNKESILSLGKLAFQQLVKGNLIFYEEDLKEAG
IDVNEASVYSGLCTQLFKEECGLYQDKVYCFVHLSIQEFLAAVYVFLSFINNNENLMDEL
QTKNKPEVTEVNFYKSAVDKALQSETGNLDLFLRFLLGLSLESNQKHLRGLLTKSRSSSQ
SHEETVKYIKEKIRENPSPERSINLFHCLNELNDHSLVEEIQSFLRSGSVSEEELSPAQW
SALVFVLLTSEKELDVFDLKKYSRSEEGLLRLLPVVKASRAALLSGCGVTEEGCASLVSA
LESNPSHLRELDLSNNDLKDSGVKLLSAGLGNPHCKLETLSLSGCLVTEEGCTSLVSALR
SNPSHLRELDLSYNHPGDSGVRLLSAGLEDPHCRLEKLNVEHGGENRMKPGLRKYVCDLT
LDPNTVNRLLSLSEENRKVTCRREEQPYPDHPERFEVWQQVLCREGLTGCCYWEVEWSGR
AGIGVTYKGINRRGGGDIGVTYKGISRRGRVSDCWLGYNDKSWSLFCTDNSYYARHNNNP
TTIDVPSSRSHRVGVYLDWPAGTLSFYRASSDTLTHLITFTSTFTEPLYPGIWVWYDDSS
VSLK
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctctggggggagagaggagggtggccctgcctctaaaatgagtctctctggg
gaacatgacaccaaagctaagagtccaatcaagcaggagagaccagcctcccctgttccc
agctgtgtgtccatgaagagtgacaagtctatgaatctacctatagagtttagagaggga
gacttttctactgaacaaagaaaccaacaggagagatcagagtcagagattctcagtggt
cagtcttcccagagtcatcaaacagacctggcctccatattcagtttgcttgaagagaaa
attatgacatttgtgaagaacgagctgaagatgttcaagaggattcttagtccagaactc
ccagaaggctttgagagtcagaagcaggaagtggtggacgctgaagatgagaagcaggag
agcagtgccagagagggggctctgaagatcacactgcacatcctgaggaaaatgaaccag
aaggagcttgctgacacactggagaaatattcagatgagcttgctgtgatttgccaacgt
gaactcaaatctaatctaaagaagaagtttcaatgtgtatttgaggggatcgctaaacaa
ggaaacccaacacttctcaataagatctacacagagctctacatcacagagggtggaaca
ggagaggtcaataatgaacatgagctgagacagattgagacaacaaccaggaaacaagca
agaccagagactgcaatcaaatgtaacgacatcttcaaacccttaactggacaagacaaa
cctatcagaactgtgctgacaaagggagtcgctggcattggaaaaacagtctctgtgcag
aagttcattctggactgggctgaaggaaaagcaaatcaggatgtccaatttgtattttca
ttcccttttcgggagctgaatttgatgaaagaggacaaacacactttcattgaacttctt
aatcacttctcaatggaaaccaaacaatcaggaatctccatctacaacaagtacaaagtt
ctgttcatctttgatggtctggatgagtgccgactgcccctagacttccagaagaacaag
atctgttgggacgtcacagagtcaacctcagtggatgttctgctgacaaatctcatcaag
ggaaatctgcttccctctgctctcctctggataactacccgacctgcagcagccaataag
atcccttctgggtgtgttgaccaggtgacagaggtacgagggttcaatgacccacagaag
gaggagtacttcaggaagagattcagtgatgaggacctggccagcagaatcatctcacac
ataaagacatcaaggagcctccacatcatgtgccacattccagtcttctgttggatttct
gcaatagtccttgaacacatgctgaaacataagagagaagagatgcccaagactctgact
gagatgtacacacaccttgtggagtttcataccaaacagaagaatgaaaagtatcttggg
aaagaagagacaggtccacactggaataaagagagcattctgtcactgggaaaactggct
tttcaacagcttgtgaagggcaatctgattttctatgaagaagacctgaaagaggctggc
attgatgtcaatgaagcctcagtgtactcaggattgtgcacacagctctttaaagaggaa
tgtgggctgtaccaggacaaggtgtactgctttgttcatctgagcattcaggagtttctg
gctgctgtatatgtgttcctctcattcatcaacaacaatgagaatctaatggatgaactg
caaacaaaaaacaagcctgaagttactgaagttaatttctacaagagtgctgtggataaa
gccttacaaagtgagacgggaaacctggaccttttcctccgcttccttctgggcctctca
ctggagtccaatcagaagcacttacgaggtctactgacaaagtcaagaagcagctctcag
agccatgaagaaacagtcaagtacatcaaggagaagatcagggagaatccctctccagag
aggagcatcaatctgttccactgtctgaatgaactgaatgaccattctctagtggaggag
atccaaagcttcctaagatcaggaagtgtctcagaagaagaactgtcacctgcacagtgg
tcagctctggtctttgtgttgctgacttcagaaaaggagctggatgtgtttgacctgaag
aaatactccagatcagaggaaggtcttctgaggctgctgccagtggtcaaagcctccaga
gctgctctgctgtcaggctgtggagtcacagaggaaggctgtgcttctctggtctcagct
ctggagtcaaacccctcacacctgagagagctggatctgagtaacaatgacctgaaggat
tcaggagtgaagctgctctctgctggactggggaatccccactgtaaactggagactctg
agcctgtcaggctgtctagtcacagaggaaggctgtacttctctggtctcagctctgagg
tcaaacccctcacacctgagagagctggacctgagctacaatcacccaggagactcagga
gtcagactgctctctgctggactggaggatccacactgcagactggagaaactcaatgtg
gaacatggtggagagaacagaatgaaacctggacttagaaaatatgtctgtgatctcaca
ctggacccaaacacagtaaacagactcctctctctgtctgaggagaacagaaaggtgaca
tgtaggagagaggagcagccgtatcctgatcacccagagagatttgaggtctggcagcag
gtgctgtgtagagagggtctgactgggtgctgttactgggaggtagagtggagtgggagg
gctggtataggagtgacatataaaggaatcaacaggagaggagggggtgatataggagtg
acatataaaggaatcagcaggagaggaagggttagtgactgttggcttggatacaatgac
aagtcctggagtctgttctgcactgacaacagttactatgccaggcacaataataatccc
actaccatagacgtcccctcctccagatcccacagagtaggagtgtatctggactggcca
gccggcactctgtccttctatagagcctcctctgacacactgacccacctgatcacattc
acctccacattcactgagcccctctatccagggatttgggtttggtatgatgactcctca
gtgtccctaaaataa
DBGET
integrated database retrieval system
