Oncorhynchus kisutch (coho salmon): 116373430
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Entry
116373430 CDS
T09179
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116373430
04020 Calcium signaling pathway
116373430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
116373430
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116373430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
UPF0542
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116373430
NCBI-ProteinID:
XP_031677885
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
FGDSRRGSAAASIDPSAYDQRSLSSPGQHFAAPLPEVRVQSVGGASRRSSWKQPQPRAPS
LKRSKTSWKRGRSPLLSREGGGEEERGGLRAATVSSLGPSSNSPLDRHQSNSLLDRHQSN
SLLDPHQTCGSGSGERCRATSHAGVENMKTGTSTCSPPQNSFRVWAKGMISHKMFDHVVL
LFIFLNCITIALERPGILPHSTERVFLSVSNYVFTVIFLAEMTVKIVALGFCWGKQSYLK
SSWNVLDGILVFVSLVDILVSLALTGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVE
TLITSLRPIGNIVLICCAFFTVFGILGVQLFKGKFYLCEGLDTRNITTKSDCLLANYRWT
RRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFLLI
VSFFVLNMFVGVVVENFHKCRQDQEEEEQRLREEKRLKILEKKRRSKEKDDTEAQQRPYY
ADYSPVRLTIHTLCTSHYLDLFITIIIGINVVTMSMEHYNQPQYLEEALKYCNYLFTCIF
IIETLLKLVAFGLHRFFKDRWNQLDLAIVLLSIMGITLEELKMNASLPINPTIIRIMRVL
RIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECNDSN
PCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECRPEERSCLTYLPLMSPVYF
VTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIALEMERARRLSSAANASALG
GAYVGPRPRSPDQEEEGQCSQEEELLSPRKMSVSRMHSLPNDSYMFPPVRSASAPYPLQE
HSSPLHQPSGSVTSVHSQPCEDQAVLPGLSHPVPAHIAPPRPSPRGLRRQVAVKVDSVEV
QSVASVDRQDPLSTLHLLSPSRSPSPPFLSDPADEEVWHITSSARHWWDRHGSGRCHSLS
PYASPDSPPSLRSRGSALSLLGAGLQAHDPRKGFSVDTQGFLDKPRCPDDQRRHSIEICP
SPPEDPLLGEVDGEERRPRGQGSEVRGHRKKRMSPPCISIHPPCDPAGRAPSEPQADCNP
LLRRRTPSYDVADAHTPTHRLTPTHSPVRTLTPTHTPTLTPTHHHTLVQTLPHAVTHTQT
HTHTHRLPHAHTLIRTHTLPHSHTHTPSPTHTLSLNSDTRPSSLYSDYKPLPQFTFDQPE
HRYTSGMSAGLSSNEPATSPSHFNSRAGFSSMNRRTAQ
NT seq
3719 nt
NT seq
+upstream
nt +downstream
nt
acttcggggattctcgtcgcggcagcgctgctgcttccatagacccctcagcctacgacc
agcgctctctgtccagccccggccagcacttcgccgctcccctcccagaggtcagggttc
agtcagtgggtggggcaagcaggaggtcaagttggaaacagcctcagccccgcgccccca
gcctcaaacgcagcaaaaccagctggaagagagggagaagtcctctgctctcgagggagg
gaggaggagaggaggaaagaggaggccttagagctgctacagtgtcctctctgggccctt
cttccaactctcccctcgaccgccaccagtccaactctctcctcgaccgccaccagtcca
actctctcctcgacccccaccaaacctgtggttccgggtcaggagaacgctgcagagcta
caagccacgctggtgtagagaacatgaagactggaacctctacctgttctccccctcaga
actcgttccgtgtgtgggctaaggggatgatttctcataagatgtttgatcacgtggtcc
tcctcttcatcttcctcaactgcatcaccatcgctctggagagacccggcattctgcctc
acagcaccgagagagtgtttctgagtgtctctaactacgtgttcactgtcatcttcctgg
ctgagatgactgtcaagattgtagcgttggggttctgctggggtaaacagagctacctga
agagcagctggaatgttctggatgggatcctggtgtttgtctctctggtggacatcctgg
tttctctggccttgaccggagggaaccgcatcctgggaatcctcagagtactacgactgc
tacgcacactacgacctctcagggtgatcagtcgagccccagggctgaagctggtagtgg
agactctgatcacgtctctgagacccatcgggaacatcgtcctcatctgctgcgctttct
tcactgtgtttggaatactgggagtacagctgttcaagggtaaattctacctctgtgaag
gcctggacaccagaaacatcaccaccaagtcagactgtctgctggccaactaccgctgga
cacgcaggaaatacaacttcgacaacctgggacaggcgctgatgtctctgttcgtgctgt
cctgtaaggatggatgggtcaacatcatgtatgatggtctggatgcagtgggagtagacc
agcagccggtgaggaaccacaacccgtggatgctcctctacttcatctccttcctcctca
tcgtcagtttcttcgtcctcaacatgttcgtgggtgtggtggtggagaacttccacaagt
gtcgtcaggaccaggaagaggaagagcagcggctacgggaagagaagaggctcaaaatcc
tggagaaaaagcgcaggagtaaggagaaggatgataccgaggcccaacagagaccctact
atgcagactactcccctgtgcgtctcaccatccacacgttgtgcaccagccactacctgg
acctcttcatcaccatcatcatcggcatcaacgtcgtcaccatgagcatggagcattaca
accagccacagtatctggaggaggctctgaagtactgtaactacctgtttacctgtatct
tcatcatcgagaccctgctgaaactagtggccttcggactgcacaggttctttaaagaca
ggtggaaccagctggacctggccatagtgctgctgtccatcatgggcatcactctggagg
agctgaagatgaacgcatcgctacccatcaaccccaccatcatcaggatcatgagagtcc
tgaggatcgctagagtgttgaagctgttgaagatggctacagggatgagagctcttctgg
acacggtcatgcaggccttgccacaggtggggaatctgggtctgctcttcatgttgctgt
tcttcatctacgcagcactgggagttgagctgtttgggaaactggagtgtaacgatagta
atccgtgtgaaggtctgagtcgccacgccacctttgagaactttgggatggcgtttctca
cgctgttcagagtctctactggggacaactggaacggcatcatgaaggacacgctgcgtg
agtgtcgtccagaggagcgctcctgtctgacctaccttcctctgatgtctccggtttact
tcgtgaccttcgtcctcatggcccagttcgtgctggtcaacgtggtggtggcggtgctga
tgaaacacctggaggagagcaacaaggaagccaaggaggacgcagagatggacgcagaga
tcgcgctggagatggagagagctagacgtcttagctccgccgctaacgcgtcggcgctag
gcggggcctacgtggggccacgcccacgctcacctgatcaggaggaggagggtcagtgca
gccaggaggaggagcttctgtccccaaggaagatgtccgtatccaggatgcattctctcc
ctaacgacagctacatgtttcctcctgtacgatctgctagcgccccctaccctctacagg
aacacagcagccccctgcaccaaccctcaggctctgtgacatcggtgcactcccagccat
gcgaagaccaggctgtactgcccggcctctctcaccctgttcccgctcacatcgccccgc
caaggccctcgcccagggggctgcgtagacaggtggctgtgaaggtggactcggtggagg
ttcagagtgttgcctcagtagacagacaggaccccctctcaaccctccacctgctctccc
cctcccgctccccctctccgcccttcctctcggatcccgccgacgaggaggtgtggcaca
tcaccagctcagcgcgccattggtgggacagacatggaagtgggcggtgtcactccctct
ccccctacgcctcccccgactccccaccctccctgaggagccgagggagtgcgctcagcc
tcctgggggcggggctacaagctcacgacccgaggaagggcttcagcgtagacacccagg
gcttcctggataaaccccgttgtcctgacgaccagcgacgacactccatcgagatctgcc
cgtcccctccggaggacccgctgctaggggaggtggacggggaagagaggaggcccaggg
gtcaggggtcagaggttagaggtcacaggaagaagaggatgagcccaccctgcatctcca
tccaccccccgtgtgacccagcaggccgcgccccctcggagccgcaggcagactgcaacc
cgctgctgagacgcaggaccccctcctatgacgtcgccgacgcacacactcccacacaca
ggctgacgccgacacactcaccggtacgcacactcacgcctacacacacgccaacactaa
cgccgacacatcaccacacactcgtacagactctcccccacgcagtaacacacacccaga
cacacacacacacacaccgcctgccccatgcacacactcttatccgtacacatactctac
ctcattcacacacacacactccgtcccccacacacaccctgtccctgaactccgacacga
gaccttcctctctctacagtgactacaagcccctcccacagttcaccttcgaccaaccgg
agcacagatacacgagtggcatgtccgctggcctatcgagcaatgaaccagccacaagtc
cctcgcactttaacagcagggcggggtttagctcgatgaacaggagaactgcccaatga
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integrated database retrieval system
