Oncorhynchus kisutch (coho salmon): 116373989
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Entry
116373989 CDS
T09179
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116373989
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
116373989
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
NGL family
116373989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Mid2
DUF7617
Sp38
Ig_6
DUF4293
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
116373989
NCBI-ProteinID:
XP_031678780
Ensembl:
ENSOKIG00005002645
LinkDB
All DBs
Position
LG4:37537753..37542770
Genome browser
AA seq
645 aa
AA seq
DB search
MLNKMTSSRQQQTMRGPRWNRALSDPLFVLLLALQLLAVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLGNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIKTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENVLSYFTTVTVETIEPVHDEGRSTVWQKVGPTP
SAGSWETVSSTSTTTTTARTPLSTRATEKTFTIPVTDLSDSSMTGLDEVMKTTKIIIGCF
VAITLMAAVMLIIFYKMRKQHHQQNHHAPQRTIEIINVDEDCVTGGPAMEGHLNLPPLEH
EHLNHYNTYKSAYNHVSTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctcttctcggcagcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgaccctttgtttgtgctgcttctagccctccagctcctggcggtggca
ggcctggtgcgcgctcagacctgcccctctgtctgctcctgcagcaaccagttcagcaag
gtcatctgcacgcggcgggggctccgtgaggtccccgacggcatatccaccaacacacgc
tacctgaacctgcaggagaacctcatccaggtgatcaaggtggacagcttcaagcacctg
cggcacctggagatcctgcagctgagcaagaaccacatccgaaacattgagattggggcc
ttcaacggcctggctagtctcaacactctggagctgtttgacaaccgcctcaccacaatc
cccaatggggcctttgagtacctctccaagctcaaggagctgtggctgaggaacaacccc
atcgagagcattccctcgtatgcgttcaacagggtgccctcactacggcggctggattta
ggggaactcaaacgcctctcgtatatctcagagggggctttcgagggcctcggcaacctg
cgctacctgaacctgggcatgtgcaatctgaaggagatccccaacctcatcccactggtc
aagctggacgagctagagatgtcagggaaccagctgacggtcatcagacctggctccttc
aaagggttgatccatctgcagaagctgtggatgatgcatgcccagatcaaaaccattgaa
aggaactcctttgacgacctgcagtcgctggtggagctcaacctggcccacaacaacctc
accctgctgccccatgatctcttcacccccctgcaccacctggagagagtccacctccat
cacaacccctggaactgcaactgtgacatcctgtggctcagctggtggctcaaagagatg
gtgccggccaacaccagctgctgtgcccgctgcagttccccagccagccacaagggacgc
tacataggtgagctggaccagaactatttccactgttacgcacctgttattgtggagcca
ccagcggacctgaacgtgacagagggtatggctgcagagctgaagtgcagggccagctct
ctgacctcagtcagttggattacgcccaatggctccatcatgacccacggtgcatacaag
atccgcatttctgtgctcaacgacggcacgctcaacttcaccaatgtcaccatgcaagac
acgggaacctacacctgcatggtaagcaactcagcaggcaataccacagcatctgccact
ctcaacgtgtcttccacagagaacgtcctcagctactttaccacagtaacagtggagacc
atcgagccagtgcacgacgaggggcgctccaccgtgtggcagaaggtaggccccaccccc
tccgccggatcctgggagactgtgtcgtccacctccaccaccaccacaacggcccggacg
cccctctccacccgggccacagagaagacctttaccatccctgtcacggacctgagcgac
agctccatgaccggcctggatgaggtgatgaagaccaccaaaatcatcatcggctgcttc
gtggccatcaccctcatggccgccgttatgctaatcatcttctacaagatgaggaagcag
caccaccagcagaaccaccatgcgccacagcgcaccattgagatcatcaatgtagacgag
gactgtgtgacaggcgggccggccatggagggccacctgaatctgcccccgctggagcat
gagcacctgaaccactacaacacctataagtctgcgtacaaccacgtctccactatcaac
tccatacacagctcggcgcacgaacctttgttaatccgggccagttcgaaagacaatgta
caagagactcagatctaa
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integrated database retrieval system
