Oncorhynchus kisutch (coho salmon): 116374867
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Entry
116374867 CDS
T09179
Symbol
hcn4
Name
(RefSeq) LOW QUALITY PROTEIN: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
116374867 (hcn4)
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
116374867 (hcn4)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
116374867
NCBI-ProteinID:
XP_031686687
Ensembl:
ENSOKIG00005017050
LinkDB
All DBs
Position
LG8:64076127..64157828
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AA seq
1330 aa
AA seq
DB search
MDRLHSSMRKRLYSLPQHIGQKAYIMGEGEDGDKDTRRKSIRMKPLPSPTSRGSLKGIGE
TRSGDTVIMETDIGRPTKTSLNGDCRRFRGSFSSITSRHVHDSDSAEQRRLITEGDVTPS
EESPPGAIGGGADQGAQGASAGGAGGAQHASLDQESGFIKLDGIDQISPDDERLYQAGFI
HRQFGAMLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMV
GNLIVIPVGITFFKDEHTPPWIIFNVISDTFFLMDLVLNFRTGIVKEDNTEIILDPQQIK
IKYLRSWFVVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRL
IRYIHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPQDCWVSKN
KMVNDTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHAT
ALIQSLDSSRRQYQEKYKQVEQNMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGXLN
EPLREEIVNFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYF
IQHGVVSVLTKGNKETKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLE
EYPMMRRAFETVALDRLDRIGKKNSLLQHKVQHDLSSGVLNYQENEIIQQIVQHDRDMAT
CAHLLQNIPPPQPPSPGHTPVIWAPLIQAPLQAAAATTSVAIALTHHPHLPHLPAALFRP
PVTVLGSRNLQDPPPGRLKKFHTSAPTSSIGPDSPSSTPSKLHCSGMDTALLASFRAHHT
TQGSGAASSSQQASSSSGTQPGPTGAFPFGPFSSSGGSPSHSTAQSTAQLHSQPQTQQPF
RCTTPPLAALFQQGVMEGAVGTGMGGAAGGATGWSSGGTTGGEIGGVAEGATGGTIRRAT
GWGRRGSIEGYTTGVHIGGATGGYSGGASGGHIRGTSGGHIGATGGAMGGHIGGAMGGAT
GGMTIGVLGTSSSGCSISPQSTGSSGNINPCQLLHSQLPPKPPQVGSLQQFAGGGRTPSG
FYHLPPPGSPSSSSTQQAPEGSPSPLAQFSLAGLQSGLVPQLSLERSALASLAQYGSANG
SPCYTPLGPSPTVQSPVTGRTFHYSDSSSATGSHSSLLMPQTSLPSQQQAAGSESLLGLG
SFSEDMKLLSCSNISLPQVVTQAMGYSSLPRSSPPRTSPPRSSPPRTSPPCSSMEPGYCF
SSPYTSPILVPKPCSSVPGHMTPPVPAQMSPGHLQHQTQSPVASPALPPRKGSAAHSELE
PVRSKLTSNL
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttgcactcctccatgcgtaaaaggctctacagtttgccacagcatattgga
cagaaagcttatattatgggcgaaggagaagacggcgacaaggacacccggaggaagagt
attaggatgaaacccttgccgtcaccaacctccagaggaagcctcaaaggcatcggggag
accagaagtggagacacggtgatcatggagacagacattgggagaccaacgaagaccagt
ttaaacggagattgtcggagatttcgtggcagtttctcctccatcaccagtcggcatgtg
cacgactcagactcggcggagcagaggcgcctcatcacggaaggggacgtcaccccgagc
gaggagagcccccccggagctattggcggtggggcggaccaaggtgcgcaaggcgccagc
gctggtggtgctggtggtgcccaacatgcttctcttgaccaggaatcagggttcataaag
ttggatggcattgatcaaatttcgccggacgacgagagattgtaccaggcaggattcata
cacaggcagtttggggcaatgctgcaaccgggggtcaacaagttctccctaaggatgttt
gggagcgaaaaggcggtggaacgggaacaagagcgggttaaatccgccggattttggata
attcacccgtacagtgatttcaggttctactgggacctgaccatgctgctgctgatggtg
gggaacctgatcgtcatcccggtgggcatcaccttcttcaaagacgaacacacgcccccc
tggatcatcttcaacgtgatctcagacaccttcttcctcatggacctggtgctcaacttc
cgcacgggcatcgtcaaggaggacaacaccgagatcatcctggacccacaacagatcaag
atcaagtacctgaggagctggttcgtggtggacttcatctcctccatacctgtggactac
atcttcctcatcgtggagacgcgcatcgactcagacttctacaagacggcccgggcgctg
aggatcgtccgcttcacgaagatcctcagcctgctcagactgctcaggctgtccaggctc
atccgatacatccaccagtgggaggagatcttccatatgacctatgacctggccagtgcc
atggtgcgtatcgtcaacctgattggtatgatgctgctgctgtgccattgggacggatgt
ctgcagttcctggttcccatgctgcaggacttcccccaggactgctgggtgtccaaaaac
aaaatggtgaacgacacatggggccaacagtactcctacgccctgttcaaagccatgagc
cacatgctgtgtatcgggtacggcatgtacccacctgtgggcatgacggacgtgtggctc
accatcctcagcatgatcgtgggcgccacctgctatgccatgttcgtgggtcacgccacc
gcactcatccagtctctggactcctcccgtcggcagtaccaggagaagtacaaacaggtg
gagcagaacatgtccttccacaagctgccagctgatatgaggcagaggatccatgactac
tacgagcatcgctaccaaggcaagatgtttgacgaggagagcatcctgggangactcaac
gagccactcagagaggaaatcgttaactttaactgtcgaaagctggtggcttccatgcca
ctgtttgccaacgcggaccccaactttgtgacctccatgctgaccaagctgcgcttcgag
gtgttccagcccggagactacatcatcagagagggcaccattggcaagaagatgtacttc
atccagcacggagtggtcagcgttctcaccaagggcaacaaggaaaccaagctctcagat
ggatcctacttcggggagatctgtctgttgacgcggggtagaagaacagccagcgtcaga
gcagacacctactgccgtctgtactctctgtctgtggacaacttcaacgaggtcctggaa
gagtaccccatgatgagacgggccttcgagaccgtggctctggaccggctggaccgcata
gggaagaagaactccctcctgcagcacaaggtgcagcacgacctgagctccggcgttctc
aactaccaggagaacgagatcatccagcagattgtgcagcatgacagagacatggccacc
tgcgcccacctcctccagaacattcctccacctcagcccccgtctccggggcacaccccc
gtcatctgggctcccctcatccaggcacccctgcaggctgctgccgccaccacctctgtt
gccatcgccttgacgcaccacccccacctcccacacctccccgccgcgctcttccgccca
ccggtcacggtcctgggctccaggaacctccaggaccctccccccggccggctgaagaag
ttccacacgtcagcgcccacctcctccattggacctgactccccctccagcactccatct
aaactgcactgctctgggatggacacagccctgctggcctccttccgggcccaccacacg
actcaggggtcaggggcagccagctccagtcagcaggcgtccagcagcagtggaacccag
cctgggcctaccggggcctttccctttggacctttctcctcctccgggggctctccctcc
cacagcacggcacagagcacggcccagctccactcacagccccagacgcagcagccattc
cgctgcaccaccccgcctctcgctgccctcttccagcagggagtcatggagggagccgtg
gggacagggatgggtggagcagcagggggagctacaggttggtcgtcaggaggcactacc
ggaggtgaaataggaggggttgctgagggggccacgggtgggacaataagaagggccact
ggttggggtagacgtgggtctatagaaggatatactactggagtacatataggaggagcc
actgggggatactcaggaggggctagtggtgggcacattagaggaactagtggaggacat
ataggagctactggtggagcaatgggagggcatataggaggggcaatgggaggggctaca
ggtggaatgacaattggagttctgggtacctctagttctggttgtagtatcagcccccag
tccactggttcatccggcaacattaacccctgtcagctgctccacagccagctgcccccc
aagcctccacaggtgggctccctgcagcagtttgcaggcgggggtaggactcctagtggg
ttctaccacctcccccctccaggctccccatcctcctcctccacccagcaggccccagag
ggctccccttctcccctggcccagttcagcctggcaggcctccagtctggcctggtccct
cagctgtccctggagaggtctgccctggcctcgttggcccagtacggctcagctaacggc
tcgccctgctacacccccctggggcctagccccacggtccaaagcccagtcacaggaagg
actttccactacagtgactcgtccagtgccacagggtcccacagctctctgctcatgccc
cagacctccctccccagccagcagcaagcagccggcagtgagtctctgctggggctgggc
agcttctctgaggatatgaaactattgtcctgttctaacatctccctgccccaggttgtg
acccaggccatgggatactcctccctcccacgctcctcaccccctcgcacctcgccccca
cgctcctcaccccctcgcacctcacccccatgctcctccatggagccaggatactgcttc
tcctcgccctacacctcccccatcctagttccaaaaccctgtagctcggtgccagggcac
atgactcctcctgtccctgcccagatgtctccaggacacctgcagcaccagactcagtcc
cccgtggcctccccggccctgccgccacggaaaggctcggcagcccactctgaactagaa
cctgtccgctccaaactaacctccaatttgtga
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