Oncorhynchus kisutch (coho salmon): 116375209
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Entry
116375209 CDS
T09179
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
116375209
Membrane trafficking [BR:
oki04131
]
Endocytosis
Others
Others
116375209
Endosome - Lysosome transport
116375209
Endosome - Golgi transport
116375209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
116375209
NCBI-ProteinID:
XP_031687204
Ensembl:
ENSOKIG00005020516
UniProt:
A0A8C7HAK6
LinkDB
All DBs
Position
LG1:complement(69479759..69698708)
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AA seq
1252 aa
AA seq
DB search
MDTWLGFCPGLHLTLCTWFLISAHTQLNAKAEITCALCQSPVQLHLKELQLDTGTHAADG
TRHAAKALEQVRLEYQLLGATDQNTGVPSDTQQAGVLVDEPRFTDDGVTPKVALEDLTGS
SENEERYRGEYNIGVDDLGKVKDGAEDVALRRAKRSGPEPPEFRESLMTGGPGLEGETSD
ERRSPGPLLDGHRLGRSEFKWNRDEGRGTSRGDDPKLSSTTFALTGDSAHNHAVVYWSGQ
NSSVILILTKLYDFHLGSVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPSNKRKI
MVLTDPEFESSVLISSDEGASYQKYRLSFYILSLLFHPTQEDWALAYSHDQKLYASMDFG
RKWQLVHEHVNRFYWSVTGLDKESDLVHMEAHTPNGRIQYVTCQALTCSELNRNYPFPGY
IDISSLVVQDDYMFIQVTTAGQASYYVSYQRDPFLKIKLPKYSLPKDLHIVSTDEHQVFA
AVQEWNQNDTYNLYLSDTRGILFTLAMENVKTTRGLGGNQMLDLYEVAGIKGMLIANRRL
DNQVKTYITYNKGRDWRLLQAPATDLAGNDIHCILPFCSLHLQLQTSENPYLSGSISTKA
SAPGIIVATGNIGSDLSYNNVGMFISSDAGNNWRQIFEEEHNVWFLDKGGALVAVKQPTV
PTRHLQISFDEGRQWTRHSFSLVPLFVDGMLVEAGTENQIMTFFGHFSHRSEWQLIKIDY
KSIFNRKCTEGDYQTWHLHNKGEPCVMGQKQIYMKRRPGNYCMLGKDYAKVLSAESCICR
AHDFECDYGYERRREGNCLPAFWFNPAVISRSCSQGQNYLNSTGYRKVVSNNCIKGVKDM
YTPRKQMCPNRAPKGLSLSTREGKLTTDLHTNVTFLVHLDEGDSMRTNIQLDFGDGTAVS
YSNLSWIEEGIRHVYKTAGIFRVSALAENTLGFDTTTLYLHVTCPVEHVQLLAPFVAIKN
KEVNLTAVVWPIHSRTVTYFWWLGNNTEPVISLDGSISYTFTSEGMNTATVQVSSANAIL
QDTKTIAVQEFFKSLLLSFSPNLDEYNPDVPEWRQDVGRVIKKALLQVSDFPEDQLLVAV
FPGVPTAAELFLLPHKNQSEGRKKSEKELEQISEILASALNQNLVEFELKPGARVIVYIT
QLTLAPLVDSIPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWMNIYAEVNQEKEQEMI
GSVSQSDSTPKTTLSEFSTPKEVMEKEMDARVKRRIGNACESTREIPNCTSV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggatacttggcttggcttctgcccaggcttgcacttaactctgtgtacctggtttctg
atctctgctcatacccagctaaatgccaaggcggagataacttgcgcattgtgccagtcg
ccggtccagctacacctgaaggaattacagctggataccggtacgcacgcggctgatggt
acgaggcatgcggccaaagctttggaacaggtccgactggagtaccagctactcggagct
actgaccaaaatactggagtaccaagcgatacccaacaggcaggtgttctcgtggatgag
ccgagattcactgacgatggagttaccccaaaagtcgctctagaagatttaaccgggtct
agtgaaaacgaagaaaggtaccgtggtgaatataatattggggtggatgatttgggtaag
gtcaaggatggtgctgaggatgttgcgttacggagagcgaagcgaagcggtcccgaaccc
cccgagtttagggagagccttatgaccggtggccccggtttagaaggagagacatcggat
gagagaaggagtcctggtccgttactggacggacacagactgggtcgatccgaattcaag
tggaacagggatgagggtcgagggacttccagaggagatgatcccaaactaagcagcact
actttcgccttgaccggggactcagcgcataaccacgcagtggtttactggtcggggcaa
aacagcagcgtgatcctgattctgaccaaactgtatgactttcacctggggagtgttaca
gagagcaccttgtggagatcaacagactatggctccacctatgagaggatgaatgacaaa
gtgggatctaagacggtgctcagttacctgtatgtctgtccatccaacaagagaaagata
atggtgctgacagaccctgagtttgagagcagtgtgctcatcagctcggatgaaggagcg
agctaccagaaataccgcctcagcttctacattctaagccttctgttccatccgacacag
gaggattgggccctagcctacagccacgaccagaagttgtacgcctccatggactttggg
agaaaatggcagctggttcatgagcatgtgaacaggttctactggtctgtaacgggtcta
gacaaggagtcagatctggttcacatggaagcacacacccccaatggacgtatacagtat
gtaacatgccaggctctcacgtgctcagagctcaacagaaactaccccttccctggatac
atcgacatcagttcactggtggtccaagatgactatatgtttattcaggttactacagca
ggacaggccagctactatgtgtcctaccagagggatccattcctcaaaatcaaactgccg
aaatattctctgcctaaagacctccacattgtcagcacagacgagcaccaggtgttcgcg
gcagtacaggagtggaaccagaacgacacatacaacctgtacctctccgacacccggggc
atcctcttcaccctggccatggagaacgtcaagaccacccgtggcctggggggcaaccag
atgctggacctgtatgaggtagcaggtatcaaaggcatgctgattgcaaacaggaggcta
gacaaccaggtgaagacctacatcacctacaacaagggccgtgattggaggttactacag
gccccggcgacagacctggctggcaacgacatccactgtatactgcccttctgttcgctc
catctccaactgcagacgtctgaaaacccctacctgtcaggcagcatatcaaccaaggcc
tcagcaccgggaatcatagtggccacagggaatattgggtctgacctgtcgtacaataac
gttggaatgttcatctcatctgatgctggtaacaactggagacagatattcgaggaggaa
cacaacgtctggtttctagataaaggaggggcccttgtcgctgtgaaacaaccaaccgtc
cccactagacatttacagatcagttttgatgaggggcggcagtggaccagacacagcttc
tccttggtgcctctgtttgtggacgggatgctggtggaggccgggacagagaaccagatc
atgacgttttttggacatttcagccataggtctgagtggcagcttatcaagatagactac
aagtccatcttcaacaggaaatgtacagaaggagactatcagacgtggcaccttcacaac
aagggcgagccatgtgtgatgggccagaaacagatctatatgaaacgcagaccaggaaac
tattgcatgctgggaaaagactacgccaaagtcctctctgctgagtcgtgtatctgtcgg
gcccacgactttgaatgtgattatggctatgaacggcgtagagaagggaactgtctacca
gccttctggttcaacccagctgtcatatcaaggagctgcagccaaggacagaattacctc
aacagcacagggtaccgaaaagtggtgtccaacaactgcatcaagggagtcaaggacatg
tacacacccaggaagcagatgtgtcccaacagggctccaaaaggcctttctctctccacc
agagagggcaagcttaccactgacctgcacaccaacgtcaccttcctggtgcatctggat
gagggggactcaatgagaaccaacatccaactggatttcggggatggcacggcagtctcc
tactccaacctgagctggatcgaagagggtatcagacatgtttacaagacggctgggata
ttccgtgtctcagccttggcggaaaacaccctgggatttgatactaccacgttgtacctt
catgttacgtgtcctgtggaacatgtccagttgctggctccatttgtggccatcaagaac
aaggaagtaaacctaacagcagtggtctggcccatccactccaggaccgtcacctacttc
tggtggctggggaacaacactgagccggtgatcagcttagatgggagcatctcgtatacc
ttcaccagcgagggaatgaacactgctacggtccaagtgtcttcagccaacgccatactg
caagacactaagacgatagcagtccaagagttcttcaaatctctgcttttatctttctcc
cctaatctggacgagtacaaccctgacgtccccgagtggagacaggatgtggggagagtc
attaagaaggctctgctccaagtgtcagactttccagaggatcagctattggttgcagtg
tttccaggtgtgccaacggccgctgagctcttcctgttaccacacaagaaccaatcagag
ggccggaaaaagagcgagaaggagctagagcagatctctgagatacttgccagtgctctg
aaccagaatctggttgagtttgagctaaagccaggagcaagagtaatcgtttacatcaca
cagctaactttggcaccattggtggattccatcccgagacacagcagttcagccatgctg
atgctcctgtcagtagtattccttggtttagcagtgtttctcatctacaaattcaagaga
aaaatcccctggatgaacatatacgcagaggtgaaccaggagaaagagcaggagatgatc
ggttcggtcagccagagtgacagcacgcctaaaaccaccctcagtgagttctctacaccc
aaagaagtcatggagaaggagatggacgccagggttaaacggcgaattggaaatgcctgc
gagagcacaagggagatccctaactgtactagcgtgtaa
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