Oceanobacillus kimchii: ACN6MR_00870
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Entry
ACN6MR_00870 CDS
T11353
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
okm Oceanobacillus kimchii
Pathway
okm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
okm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACN6MR_00870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
okm03000
]
ACN6MR_00870
Transcription factors [BR:
okm03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACN6MR_00870
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Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_12
TPR_1
TPR_2
TPR_8
TPR_10
T_Ag_DNA_bind
HTH_31
Motif
Other DBs
NCBI-ProteinID:
XQA41615
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Position
complement(153138..154424)
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AA seq
428 aa
AA seq
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MNNIGDIIKLERLKQQIKQTQLAKGICSTSYLSKIENNTTTASDEVINLLLQKLNIELSD
QEKNEDAFIEEIRAISKRARIYRESKFIEEKLNELQYIKNIYRKTTFLELQLLILRLTLF
FEDKERSTFYLEYLEQEKDNFTPNQKFLFLQCKAIFHHTYADIHQALKCFKEALVVSDDI
VLEGWERADHHYMLAIAYNSCDEVINTIEYGKLSLKYFQRAFIINRTIDCYLLIGIAYKK
GNNLKEALDSYELALKMTNETRMLEDVELLKGVIYQNLGSLSSHLQPEKVIPYYKKSLSY
KQKANNKLVTIFSIVIEYAKYEKWDKVSYWIDQGFALIKDAPEAHPKYTYHLKVYQDLAN
YQYITEEVGVAAINYFDEIQDLRHCLKYSGWLANGFKTRGKYKLASIYFQMSQEYLLKRM
NIEYIGDL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaataacattggggacattattaaactagaacggctgaagcagcaaattaaacaaact
caattagcaaaaggtatttgttccacatcctatttaagtaaaattgaaaacaataccact
acagcaagtgatgaggtcattaaccttttattacaaaaattgaatattgagctttccgat
caggaaaaaaatgaggatgcatttattgaggaaatacgcgccatttctaagcgagctcga
atttatcgagaatccaaatttatagaagaaaaattaaatgaactgcaatatataaagaat
atttaccgtaaaacgacatttttagaactgcaattactgattttacgattaacacttttc
tttgaagacaaagaacgtagtactttttatctagaatacttagaacaagaaaaagacaac
tttacaccaaatcaaaaatttttatttttacagtgcaaagcgatttttcaccatacttat
gcagatattcatcaagccttaaagtgttttaaagaggctttagtagtatcagatgatata
gtactagaaggatgggagagagctgatcatcactacatgcttgccattgcatataattcc
tgtgacgaagtaattaatacaatagaatacggaaaactttctttaaagtattttcaacgt
gccttcattatcaaccggaccattgactgttatctgttaattggaattgcttataagaaa
ggaaataatcttaaagaagcactcgattcttatgagctagctttaaaaatgacaaatgaa
actcgaatgttagaggatgttgaactcttaaaaggagtaatttatcaaaatctaggttca
ttgagttctcatttacagccagaaaaggtcattccatattataaaaaaagcctatcctat
aaacaaaaagcaaacaacaaacttgttaccattttctctatcgtaattgaatatgcaaaa
tatgagaaatgggataaggtttcttattggatagatcaaggatttgccttaataaaagac
gcaccggaagctcacccaaaatacacgtatcatttgaaagtgtatcaagaccttgccaat
tatcaatatataacggaagaggtaggagttgcagcaattaattactttgatgaaattcaa
gacctgagacattgtttaaagtattccggatggcttgctaatggattcaaaacaagagga
aagtataagcttgcttctatatactttcaaatgtctcaagaatacctattaaaacgtatg
aacattgaatatattggcgatttatag
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