Oceanobacillus kimchii: ACN6MR_02205
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Entry
ACN6MR_02205 CDS
T11353
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
okm Oceanobacillus kimchii
Pathway
okm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
okm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN6MR_02205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
okm03019
]
ACN6MR_02205
03009 Ribosome biogenesis [BR:
okm03009
]
ACN6MR_02205
Enzymes [BR:
okm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACN6MR_02205
Messenger RNA biogenesis [BR:
okm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACN6MR_02205
Ribosome biogenesis [BR:
okm03009
]
Prokaryotic type
rRNA helicases
ACN6MR_02205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XQA41870
LinkDB
All DBs
Position
418979..420466
Genome browser
AA seq
495 aa
AA seq
DB search
MTKFNELGVSAPIMKALEKMGFEEATPIQAETIPHALEGHDVIGQAQTGTGKTAAFGIPL
INKINPKVRKVQGLIVAPTRELAIQVAEEINRLAKFKSVRALAIYGGQPMDRQIRALKDG
PHIVVATPGRLLDHMRRKTIRIDEVHTAVLDEADEMLNMGFIDDIRDILKGIPEERQTLL
FSATMPKEIRNIATTLMKEPKEVKVKAKEMTVENIDQYFIEIPEKYKFDTLNNHLDINSP
ELAIIFARTKKRVDEVAEGLQARGYRSEGIHGDLTQGKRMSVLKKFKQGRVDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKMGEAISFITPREMAHLNLIEQTTK
SKMKRMAPPTNQDARRGQQQVTIEKLKKAINEKDLKVYEDAAKELLDEYDSITVVSAAIS
MMTKERRDTPVRISSVAPISVKKAKNQKDNKNNRRSNNKRFYGGRGQGGRNQGGRGQGGR
NRKGKGNYQRRNRDN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaattcaacgaactaggtgtttccgccccaatcatgaaggcattagaaaaaatg
gggtttgaggaagctacaccaattcaagcggaaactatccctcatgcactagaaggtcat
gatgttattggccaagcacaaacaggaacaggtaaaacagctgcatttggtattccgtta
atcaataagataaatccaaaagtaagaaaggtgcagggcttgattgtagcacctacacgc
gaacttgctattcaagtagcagaagaaataaatcgtttagctaaatttaagagtgtaaga
gctcttgcaatatatggtggtcaaccaatggatcgtcaaattagagcgttaaaagatggt
ccacatattgttgtggcaacaccaggtagattattggatcatatgcgtcgcaaaacaatt
cgcattgatgaagtgcacacagctgttttagatgaagctgatgaaatgcttaatatggga
ttcattgacgatattcgtgatattctaaaaggtattccagaagaaagacaaactttactt
ttctctgcgacaatgcctaaagaaatccgtaatatcgctactacgcttatgaaggaacca
aaagaagttaaagttaaagcgaaagaaatgactgtagagaatatcgatcagtattttatc
gaaattcctgagaaatataaatttgatactttaaacaatcatttggatattaattcacca
gaacttgcgattatatttgcacgtacgaaaaagcgtgttgatgaagtagctgaagggtta
caagcaagagggtatcgctctgaaggtattcacggtgacttaacacaaggaaaacgtatg
tctgtgttgaagaaattcaagcagggtcgtgttgatgtattagtagcaacagacgtagca
gcacgcggtcttgatatttctggggtaacgcatgtttataactttgatatcccgcaagat
ccagaaagctacgtacaccgtattggacgtacaggacgagctggaaaaatgggtgaggca
atttctttcattactccaagagaaatggctcatttaaatcttattgaacaaacaacaaag
agtaagatgaagcgtatggcaccaccaacgaatcaagatgctcgtcgtggacaacaacaa
gtaacgattgaaaagctaaagaaagcaattaatgaaaaagacttaaaagtatacgaagat
gcagcgaaagaattattggatgagtacgattcaattacagttgtttcagctgctatcagt
atgatgacgaaagagcgtcgtgatacaccggttcgtatttcttctgtcgcaccaatcagc
gtgaagaaagcgaaaaaccaaaaagataataaaaataatagacgttctaataacaaacgt
ttctatggtggtcgtggacaaggtggccgtaaccaaggaggacgcggtcaaggtggtcgc
aaccgaaaaggaaaaggtaattaccaacgccgtaatagagataattaa
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