Oceanobacillus kimchii: ACN6MR_02305
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Entry
ACN6MR_02305 CDS
T11353
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
okm Oceanobacillus kimchii
Brite
KEGG Orthology (KO) [BR:
okm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
okm03021
]
ACN6MR_02305 (sigB)
Transcription machinery [BR:
okm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACN6MR_02305 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
GerE
Sigma70_ECF
HTH_3
HTH_28
HTH_23
HNF-1_N
ELMO_ARM
HTH_37
DUF134
Motif
Other DBs
NCBI-ProteinID:
XQA41890
LinkDB
All DBs
Position
437269..438060
Genome browser
AA seq
263 aa
AA seq
DB search
MTTKSQPHNKGGDEVYQWIEYLQKDPTNEEIQEKIVLKYQDLVGSIARKYSKNSAIHEDL
VQVGMIGLLAAVRRYDPTYGKSFESFAIPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIR
KAVDELTTDNQKSPTVTEIANYIGTSEEEILETMEMGQSYKALSVDRKIEADSDGSTVAI
LDLVGNSEDGYDNVEQRMMLEKILPILSEREQQILECTYFKNMSQKETGELLGISQMHVS
RLQRRSLRKLREAIQSESTEVLD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaaatctcaaccacacaataaagggggagatgaggtttaccaatggattgaa
tatctacagaaagatccaactaacgaagaaatacaagaaaaaattgtcctgaagtatcaa
gacttagtgggatccatcgcgagaaagtattccaaaaatagtgcgattcatgaggattta
gtacaagtaggaatgattggattactagcagcggtaaggagatatgatccaacatatggt
aagtcatttgaatcctttgctataccaacaattataggtgaaattaaacgatttatacgt
gataaaacatggagtgtacatgtaccacgacgtattaaagaattaggaccaaaaataaga
aaagcagtagacgaattaactacggataatcagaaatctcctactgtaaccgaaatagca
aattatattggtacatcagaagaagaaattttagaaacgatggaaatgggtcagagctat
aaagcattatcagttgatcggaaaatcgaagctgattctgatggaagtacagtggctatt
ctagatcttgtaggaaatagtgaagatggttatgataatgtagaacaacgcatgatgcta
gaaaaaatacttccgattttatctgaaagagaacaacaaatattagaatgtacgtatttt
aagaatatgagtcaaaaagaaacaggagaactccttggtatatctcaaatgcacgtttct
agactacaacgtcgttctttaagaaagcttagagaagcgattcagtcggagagtacggag
gttttagattga
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