Oceanobacillus kimchii: ACN6MR_05470
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Entry
ACN6MR_05470 CDS
T11353
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
okm Oceanobacillus kimchii
Brite
KEGG Orthology (KO) [BR:
okm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
okm03019
]
ACN6MR_05470 (yhaM)
Messenger RNA biogenesis [BR:
okm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACN6MR_05470 (yhaM)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DUF3921
Motif
Other DBs
NCBI-ProteinID:
XQA42453
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All DBs
Position
1087317..1088270
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AA seq
317 aa
AA seq
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MKNGIAFRTIGEEFDGFLLIKESTRGTTSNGKPFLTLILRDASGEIEAKLWDATKDDEET
LIPEQIIQVSGEINQFRGKHQLKILSIRLAQPMDNVQVTDFLGKAPMEKEELAEKLTEAI
FEMENPKIQRLVRAFIKKYQEELLTYPAATKNHHEFASGLAYHVVSMLAIGKELHKLYPE
INKDLLYAGIILHDIGKIKELSGVVSTTYTLEGKMLGHIPMMVEEIGLMANELKIEGEEV
LILKHLVLSHHGKAEWGSPTPPLVREAELLHLIDLIDAKMNMLGRALEKVQPGEFTERLF
AMDNRAFYKPNFEENEG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatggtatcgcatttcgcacgattggagaagaatttgatggatttctattaatt
aaagaatctacaaggggtactaccagtaatggaaaaccatttctaaccttaatacttcgt
gatgctagcggcgaaatagaagcaaaactttgggatgcaactaaagatgatgaagaaaca
ctgattccagaacaaattattcaagtttcaggtgaaattaaccaatttcgaggtaagcac
caattaaaaatattatctatccgtttagctcaaccaatggataatgttcaagtaacagac
tttttaggtaaagcacccatggaaaaggaagaattggcagaaaaattaactgaggcaatt
tttgagatggagaaccctaaaattcaacgtctagttcgtgcatttattaagaaatatcag
gaagagttactaacctatcctgcagcaaccaaaaatcatcatgagtttgcatctggacta
gcatatcatgtcgttagtatgttggctattggaaaagaattgcacaagctctaccccgaa
attaataaagacttattatatgctggaattatactgcatgatattggtaagattaaagaa
ctttctggtgttgtttctactacttatacattggaagggaaaatgcttggacatataccg
atgatggttgaagaaattggattaatggctaatgagttgaaaattgaaggagaagaggtg
ctcattttaaaacatctcgttctaagtcaccacggtaaagcagaatggggaagtcctacc
ccgccattagttcgtgaagctgaactactacatttaatcgatttaatagatgcaaaaatg
aatatgttaggtcgagcgttggaaaaagttcaaccaggagagttcacggaaagacttttt
gctatggataatcgtgctttttacaaaccgaattttgaagaaaatgaaggatag
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