Oceanobacillus kimchii: ACN6MR_10085
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Entry
ACN6MR_10085 CDS
T11353
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
okm Oceanobacillus kimchii
Pathway
okm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
okm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACN6MR_10085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
okm03400
]
ACN6MR_10085
Enzymes [BR:
okm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACN6MR_10085
DNA repair and recombination proteins [BR:
okm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACN6MR_10085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
AAA_14
AAA_12
AAA_22
nSTAND3
DUF5700
DUF4926
YajR_YAM
TsaE
AAA_7
AAA_16
AAA
RsgA_GTPase
AcMNPV_Ac75
Zeta_toxin
AAA_28
UvrD-helicase
ICL
TrwB_AAD_bind
AAA_18
SLFN-g3_helicase
DUF815
ABC_tran
NPHP3_N
DEAD
AAA_5
DUF8139
AAA_29
Motif
Other DBs
NCBI-ProteinID:
XQA43344
LinkDB
All DBs
Position
complement(1960329..1962653)
Genome browser
AA seq
774 aa
AA seq
DB search
MTDYIMSEDQNIPLFAKGTVLTTIFQNAAEHFSIIRVQIDDTNLDYDDKEIIVKGYFDTL
QEQTAYCFYGELEKHPRYGTQLKVHSYETIIPSSRDGLISYLSSDLFYGVGKRTAERIVD
KLGEQAISKILDNDDALMGIKGLSKETAERLSNRLKENQGFEHVAVHLATYGIGLKMAQV
IYQTYKDEAIELLKQDPYQFVFDIEGFGFRTADQIATQQGIAGTHESRIGAGVIFVLQQA
IQSGHVYIPLRLCLEEVVDLLRIATSDIEIVTEVFNQLNVAKKIIVIDEKVYLPSLYYAE
DGFAANLKRIIDKPLEENIPMAEMLKIIGSIEEEEVLSYGKEQFDAINHAIHSKLMILTG
GPGTGKTTVIKGILKAYAALQKVSLDLKDYKNKSDFPFVLTAPTGRAAKRMTESTGIPAV
TIHRLLGWNGIGSFEKDEHDQIDGKLLIVDEFSMVDIWLANHLFKAIPADMQVLLVGDED
QLPSVGPGQVLTDLMHSNLLPTVSLQEVYRQKEGSKIIQLAHDIKQDNCTTSSLSNDRDF
SFISCREPQMIEVISSIMKKAKAKGIDLNNIQILAPMYRSQAGINIINQELQKLINPSTE
KRREIHYQDVIYRIGDRVIQLVNQPEDGVYNGDIGEIVAIFKPEENTEHEEQIVIAFEDK
EVVYIRKDYNNFTHAFCISIHKSQGSEFPIVLLPVVYAHHRMLRKNLLYTAITRSKESLI
ICGEQSAFIKGVNTKDTNQRNTSLKDALVSRIENESIKKDIQQDDEEVSPYDFM
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgacagattatattatgtctgaagatcaaaatatacctttatttgccaaaggtaccgtt
cttactacaatatttcaaaatgcagccgaacatttttcgattattcgtgtccagatagat
gatacgaatctagattatgatgataaagaaattattgtaaaaggttattttgataccctt
caagaacagacggcttactgtttttatggtgaattagaaaaacatccgaggtatgggaca
caactaaaggttcattcttatgaaacaataataccaagttcaagagatggtttgataagt
tatttatcaagcgatctcttttatggcgttggaaaaagaactgcagagagaattgtagat
aaactcggtgagcaggcaatatcaaagattttagataatgatgacgctttaatgggaatt
aaaggtttatctaaagagacagctgaacgactgtcaaatagacttaaagaaaatcaagga
tttgaacatgttgctgttcatttagcaacatatggtattggcttaaaaatggctcaagtt
atttatcaaacgtataaggatgaagccatagaattattaaagcaagacccatatcaattt
gtatttgatattgaaggatttggctttcgaacagccgatcaaatagcaacgcaacaaggt
atagctggaactcatgaaagtaggattggagcaggggttatctttgttttacagcaagct
attcaatctggccatgtatacatacctttacgattgtgtttggaagaagttgtagattta
ttacgtattgctacaagtgatatagagattgtcactgaagtttttaatcaattaaatgta
gcaaagaaaatcatcgtcattgatgaaaaagtatatttaccttctctttactatgcagaa
gatggctttgctgcaaacctaaagcgaattatagataagccactggaagaaaatatccct
atggcagaaatgttaaaaattattggttctattgaagaagaagaagtattaagttacgga
aaagaacagtttgatgctattaatcatgcaatccattcaaaattaatgattttaaccgga
ggtcctggcacgggaaaaaccaccgtaataaaagggatcctaaaagcgtatgcggctttg
caaaaagtatcgttagacctaaaagattataagaataagtcagatttcccttttgtgctc
acagctcctacaggaagagcagccaagcgaatgacagaatctacaggaattcctgcagta
accattcatcggttattaggttggaatgggattggtagctttgaaaaagatgagcatgac
caaatagatggaaagttattaatagtggatgaattttctatggttgatatatggttagca
aatcatttgttcaaagctattccggcggatatgcaggtgttattagtaggtgatgaagat
caacttccttctgtagggccgggacaagttttaacggaccttatgcatagtaacttgtta
ccgacagtctctctacaagaggtataccggcaaaaagaaggctcaaaaatcattcagtta
gctcatgatattaaacaagataattgtacaacatcgtctttatccaatgatcgagatttt
agctttatttcatgtagagagcctcaaatgatagaagttatatcttccattatgaaaaag
gcaaaagcaaaaggaatagatttgaataacattcaaatcttagctccgatgtatcgttct
caagcaggtattaatatcatcaaccaggaactgcaaaaattgataaatccatcaactgag
aagcgtagagagattcattatcaagatgtcatttaccgtattggcgatcgagttattcaa
cttgtcaatcaacctgaagatggcgtttataatggtgatattggcgagattgttgcgata
tttaaaccagaagaaaacaccgaacatgaagaacaaattgtcattgcttttgaagataaa
gaagttgtttatattcgtaaggactataataatttcacacatgccttttgtatttcgatt
cataaatcgcaaggaagcgaatttccaattgtactcttaccggttgtatatgcacaccat
cgtatgttgagaaaaaatttattgtatacagcgataacgagaagtaaagaatcgttgata
atatgtggggaacaatccgcatttattaaaggtgtaaataccaaagatacaaatcaacgt
aatacttcattaaaagatgctttagtctcacgaatagaaaatgaatctataaaaaaagac
atccaacaagacgatgaagaagtttccccatatgactttatgtaa
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