Oceanobacillus kimchii: ACN6MR_10160
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Entry
ACN6MR_10160 CDS
T11353
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
okm Oceanobacillus kimchii
Pathway
okm03410
Base excision repair
okm03430
Mismatch repair
okm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
okm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACN6MR_10160 (recJ)
03430 Mismatch repair
ACN6MR_10160 (recJ)
03440 Homologous recombination
ACN6MR_10160 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
okm03400
]
ACN6MR_10160 (recJ)
DNA repair and recombination proteins [BR:
okm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACN6MR_10160 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACN6MR_10160 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACN6MR_10160 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Cecropin
DSPc
Motif
Other DBs
NCBI-ProteinID:
XQA39636
LinkDB
All DBs
Position
complement(1977389..1979704)
Genome browser
AA seq
771 aa
AA seq
DB search
MLESKMKWRYNQIEDHKSSLLENTDQSPLMKQLFIQRGLTTNEEVQRFLSPQIEDLHQPF
LLKDMEKAVQRVHKAIQNEEKILVFGDYDADGVSSTVVMLKALTELGAKCDFYIPNRFTE
GYGPNETAFRTASEQGYNVIITVDTGITSVHEADIANELGMDLIITDHHEPQTNIPECFA
IIHPKCSPDYPFKELAGVGVALKFAEAILGYFPVQLLSYAAIGTIADLVPLFDENRVIAY
YGLEELRTTTDVGLKALIQVCQLEDLDEQSIGFSIGPRLNAVGRLQDADLAVELLLMEDM
ESAIEIANEINKINDERKKVVQRIVSEADQIVKSKPERRIIVVSNEGWNQGVLGIVASHL
VRKYDRPAIVLSTQPELGVVKGSARSIPAFDLFEGCMRMRDLFTHFGGHSQAAGMTLPIE
NVDKLEFQLDNILNNELAEEDLKQELEISGQLSLEHITLELIRDISKLAPFGMKNPKPVF
QIKEIPADIKRIGSQKNHLKMQFRKSSTRMDAIGFGWGDVYNQIAPQTPIKIAGELSINE
WNGNQTAQLMIQDMKIDEWQLFDFRGKRRENIIPHFEEDAIIVSNQTKNMVSEVSQVSYN
KDIISDYNKCQTVYIDELPKHLDDLKYVINYFQPKKIVACYEVESSNYLFAFPSREDFVW
FYALIKKQGPFHMHTYLDSLRKHKGWNDDKINFMSEVFSDLGFVKIENGKITALDSPLKK
DLSESTVYQSREQQSEIEKQLYYSNYEDLRKWFMECMDYLENPREEATHGI
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttagagagtaaaatgaaatggagatataatcagatagaagatcataaaagttcttta
ctagaaaatactgatcaatctccattaatgaagcagttgtttattcaaagaggactaaca
acaaatgaagaggtgcaacggtttctatccccgcaaatagaagatcttcatcaaccattt
cttttaaaggacatggaaaaagcggttcaacgagtacataaagcaatacaaaatgaagaa
aagattttagtatttggcgattatgatgcagatggagtaagttcaacagtagtaatgtta
aaagcattaactgaactaggggctaaatgcgatttttatatacctaaccggtttacggag
ggctatggtcctaatgaaacggcatttcgtaccgcatctgaacaagggtataatgtaatt
attactgtagatactggtataacgtcggttcatgaagcagatatagctaatgaactaggt
atggatttaattattaccgatcatcatgaacctcaaaccaatataccagaatgcttcgcg
attattcatcctaaatgttctcccgactatccgtttaaggaattagctggagttggagta
gctttaaaatttgcagaagcaattctggggtattttcctgttcagttattatcatacgct
gcaattgggacaattgctgatttagtacctttattcgacgagaatagagtaatagcctat
tacgggttagaggaattacgaacgactacggatgtaggtttaaaagcattaatacaagta
tgccaactagaagatttagatgagcagtccataggtttttctattggtccacgattaaat
gctgttggaagattacaggatgccgacttagcagtcgaattacttcttatggaagatatg
gaatcagctatcgaaatagcaaatgaaatcaacaaaataaacgatgaacgaaagaaagtt
gttcaacgtatcgttagtgaagccgatcaaattgtgaaatcaaaaccagagcgtagaatt
attgtagtttctaatgaaggttggaaccaaggagttctcggaattgtggcttcacatctt
gttcgaaaatatgatcgaccagcaattgtattatcaactcagcctgaattaggagttgtt
aaaggctctgctcgtagtattcctgcttttgatttatttgaaggctgtatgcgtatgaga
gatctgtttacacactttggtggacactctcaagctgctggtatgacgttaccgatagaa
aatgtagataagttagaatttcaacttgataatatattaaacaacgaacttgctgaagaa
gatttaaaacaggaattggaaataagtggacaattaagtttggaacatattactttagaa
ttaataagggatatttcaaagcttgctccttttgggatgaaaaacccgaagcctgttttt
caaattaaagaaattcctgcggacataaagcgaattggtagccaaaagaatcatttaaaa
atgcaatttcgtaaaagttctactcgtatggatgctattggcttcggatggggtgacgta
tataatcaaattgccccgcaaacaccgataaaaattgctggggaattatcgattaacgaa
tggaacggtaaccagactgcacaattaatgattcaggatatgaagatagatgagtggcag
ttatttgattttcgaggtaaacgtagagaaaatattattcctcattttgaagaggatgca
atcattgtaagtaatcaaacaaaaaatatggtaagtgaagttagtcaagttagttataat
aaagacattattagtgactataacaaatgccaaacagtttatatagatgaacttcccaaa
catttggatgatttaaaatatgtgattaattattttcaaccaaagaaaattgtagcttgt
tatgaagtggaatcaagcaattatttatttgcgtttcctagtagagaagattttgtgtgg
ttttatgcattaataaagaaacaaggcccattccatatgcatacttatctagattcgtta
agaaagcataaaggttggaatgatgataaaattaattttatgtctgaagtgttttcagat
ttaggctttgttaaaatagaaaatggtaaaataacggcattagatagtccacttaagaaa
gacttatcagaatcaactgtttatcaatcgcgagagcaacaatctgagatagaaaaacaa
ctgtattattcaaattatgaggatttaagaaaatggtttatggagtgcatggattatttg
gaaaatccgagggaggaagcaacacatggaatttaa
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