Oceanobacillus kimchii: ACN6MR_15490
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Entry
ACN6MR_15490 CDS
T11353
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
okm Oceanobacillus kimchii
Pathway
okm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
okm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN6MR_15490 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
okm03021
]
ACN6MR_15490 (rho)
03019 Messenger RNA biogenesis [BR:
okm03019
]
ACN6MR_15490 (rho)
Transcription machinery [BR:
okm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACN6MR_15490 (rho)
Messenger RNA biogenesis [BR:
okm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACN6MR_15490 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA
ATPase_2
Spore_III_AA
NB-ARC
Mor
AAA_25
Motif
Other DBs
NCBI-ProteinID:
XQA40668
LinkDB
All DBs
Position
complement(3128126..3129406)
Genome browser
AA seq
426 aa
AA seq
DB search
METLTISNLETMTLKEIYALAKEYKVSYYAKLTKKELIFAILKAQAEKDGFLFMDGILEI
IPSEGFGFLRPINYSPSAEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVDA
VNDEDPDSSKERVHFPALTALYPNRTIQLETKTNQLSTRIMDLMTPVGFGQRGLIVAPPK
AGKTMLIKEIANSISKNHPHAKLIILLVDERPEEVTDIERSVSADVDVVSSTFDEVPESH
IKVSELVLERAMRLVEHKRDVIVLMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKR
FFGAARNIEEGGSFTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRHLADRRIFPAID
IMRSGTRKEELLVDKSHLDKMWAIRKTMQDSHDFLDRFLKRLKQSKSNEEFLQLMEEEMK
RKGISR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtggaaacattaacaatctctaatttagagacaatgacattaaaggaaatttatgcgttg
gcaaaggaatataaagtttcttattatgctaagctgaccaaaaaggaactaatttttgct
attctaaaagcacaagcggaaaaagatggatttctatttatggatggcatccttgaaatt
ataccttctgaaggtttcggttttcttcgtccgatcaattattctccaagtgcagaagat
atctatatttctgcttcccaaatacgtcgatttgatttaagaaacggtgataaagtttca
ggtaaggtacgtccacctaaagaaaatgaaagatattatggattacttcatgtcgatgca
gttaatgatgaagatcctgattcttcaaaagaacgtgttcattttccagcattaacagct
ctatatccaaatcgtacgatacaactcgagacaaaaacaaatcaattatctacaagaatt
atggacttgatgactccagtaggttttggtcagcgtggattaattgttgcgccgccaaaa
gctggtaagacaatgttgattaaagaaatcgcaaacagcatctctaaaaaccatcctcat
gcgaaattgataattttattagtagatgagcgacctgaagaagtaacagatattgaacgc
tctgtctcggccgatgtcgacgtagttagctctacgtttgatgaggttccagaaagccat
attaaggtttctgaattagtattagagcgcgcaatgcgtttagttgaacacaagcgggat
gtcattgtacttatggatagtattactcgtctagcaagagcgtataacctagttattcct
ccgagtggacgaacgctttctggtggtattgaccctgcagcatttcaccgtcctaaacga
ttctttggtgctgcccgaaatattgaagagggtggtagttttacaattcttgcaaccgct
cttgttgataccggatcacgcatggatgatgtgatctatgaagaatttaaaggtacaggt
aatatggaactgcatctcgatcgtcatcttgccgaccgacgaattttcccagcgatagat
attatgcgttcgggtacacgtaaagaagagttactagttgataaaagtcatcttgataaa
atgtgggcaattcgtaaaacaatgcaggattcccatgatttcttagaccgtttcttaaaa
cgattaaagcaatcgaaaagcaatgaagaatttcttcaattaatggaagaagagatgaaa
cgaaaagggatttctcgatag
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