Oceanobacillus kimchii: ACN6MR_20120
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Entry
ACN6MR_20120 CDS
T11353
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
okm Oceanobacillus kimchii
Pathway
okm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
okm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACN6MR_20120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
okm03400
]
ACN6MR_20120
Enzymes [BR:
okm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACN6MR_20120
DNA repair and recombination proteins [BR:
okm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACN6MR_20120
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
Herpes_Helicase
SH3_13
UvrD-helicase
SLFN-g3_helicase
nSTAND3
PhoH
AAA_22
DUF8139
AAA_12
DUF6079_1st
DEAD
HerA_C
AAA_29
Motif
Other DBs
NCBI-ProteinID:
XQA43673
LinkDB
All DBs
Position
unnamed:complement(77648..79600)
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AA seq
650 aa
AA seq
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MIKSIEKETLQEEIFNSSRLPRDHTHEMMQQNIYRTILYGVPFRLADEFAHATKEFQYND
SRRIVGAMCNVYMNKLSHGNTTLYDLNDKVRKINGRSVITSKGSFRELVSKTLSQSNDLF
QEQSKLWEWYEDKEGKVHPRLDKNYFYTALEQMNDIKLHNRKLFDFSEYNGRYSLYHLPT
YWSEYQLAKRILEIIHGKSILKTSKDVAKLKAINYGADTEQALAISEVFDNKVSIITGGA
GTGKSKTIEILANVLLDENANLSIRVCSPTGIAAQNLQNRFMTSPSENVRSYFSDSVNKC
RTIHSLLEVKPSKSIGMIRSKYSYKKDPLIADVLIIDEAGMVDIYLMRSLLWALKDYVHV
VIVGDSNQLNSVGPGKILYDLTHSLKRLQEKVFVTPLPKWSKLNLIHRTEDDSRIPFLAN
TLLTPNRDERWNYFNQEMERCIEKGDVRYIQAKETKDILNLTVNEYLNDHSSVENVALIT
TRHEQTVGRNILNEKIQNNLMKRIGLEEGVIIIQNRNDYQHGVFNGEKGKITKVIENKIT
AEFTGERTISLYKNQAENDWLIGYAITVHKSQGTEAETVLLPIWNEPKSKIWNRSLLYTA
ITRSKKKLIIVGNNDALEQGVKNKEGSRLTRLPLFFREIAKRYMQNKLRF
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
ttgattaaatcgattgaaaaagaaacattacaggaagaaatatttaattccagtagatta
ccaagagatcatacgcatgaaatgatgcagcaaaatatttatcggacgatactatatggc
gtacctttccgattagccgatgaatttgctcatgcaacaaaggaatttcaatataatgac
tctagacgcatagtgggagcaatgtgtaatgtttatatgaataaactttcacatggaaat
acaaccttatatgacttaaacgataaagttagaaaaataaacgggagaagtgtaattact
agtaaggggagttttcgtgaattagtttctaaaacactatctcaatccaatgacttgttt
caggaacaaagtaaactctgggaatggtatgaggataaagaaggaaaggttcatcctcgt
ttagataaaaattatttttatactgctttagaacaaatgaatgatattaaattacataat
cggaaactatttgattttagtgaatacaacggtagatattcattgtaccatttacctaca
tattggtcagaatatcaactagcaaaacggatcctagaaattatacatggtaagagcata
ctcaagacttctaaagatgttgcaaaattaaaggcaataaattatggtgcagatacagaa
caagcactagcaattagtgaggtttttgacaataaagtatctattattactggaggagca
ggtactgggaaaagtaaaacaatcgaaattttggctaatgtattactagacgaaaatgcg
aatctatctattcgtgtctgttccccaacaggtattgcggcccaaaacctacaaaatcga
tttatgacttcaccatcagaaaatgtacgttcctatttttcagactctgtaaataaatgt
agaactatccatagtttgttggaagtaaaaccatctaaatcaattggaatgattcgttca
aagtattcttataaaaaagacccattaatagccgatgttcttattatagacgaagcgggt
atggtggatatttacttaatgcgtagtttattatgggccttaaaggattatgttcatgtt
gtaatagtaggagatagtaaccaactaaatagtgttggtcctggaaaaatattatatgac
cttacacatagtttaaaaaggttacaagaaaaagtatttgtaacacctttgcctaaatgg
tctaaattaaatttaattcaccgaacagaagatgattctcgtattccatttttagccaat
acattattaactccgaacagggatgaacgttggaattactttaatcaagaaatggaaaga
tgtattgaaaagggagacgttaggtatatacaagcaaaagaaacgaaggatattcttaat
ttaaccgtgaacgaatatttaaacgatcatagttctgtggagaatgtagcattaattact
acaaggcatgaacaaactgtaggtagaaatatattaaatgagaaaatacagaataatctt
atgaaacgtataggtttagaagagggcgttatcattattcaaaatagaaatgattatcaa
catggtgttttcaatggggaaaaggggaaaattacaaaagtcatagaaaataagataact
gctgaatttaccggagagagaacaatttccttatacaaaaatcaagctgaaaatgattgg
ttgattggttacgctattactgtgcataaatcacaaggcacagaagctgaaacagtttta
ttacctatttggaatgagccaaaatctaaaatatggaatagatcactattatatacagct
attactcgtagtaaaaaaaagttaataattgtcggtaataatgatgcacttgagcaagga
gtaaaaaataaggaaggaagtcgtttaacgagattgcctcttttcttccgggaaattgct
aaaagatatatgcaaaataaattaagattttaa
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