Owariibacterium komagatae: Ruko_00570
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Entry
Ruko_00570 CDS
T10753
Symbol
pcrA_1
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
oko Owariibacterium komagatae
Pathway
oko03420
Nucleotide excision repair
oko03430
Mismatch repair
Brite
Enzymes [BR:
oko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ruko_00570 (pcrA_1)
DNA repair and recombination proteins [BR:
oko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ruko_00570 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
Ruko_00570 (pcrA_1)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BFJ83640
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Position
43640..46153
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AA seq
837 aa
AA seq
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MSQSLDNKFLELRRNYIASQFGKLNDVQKQAVFYTQGPLLILAGAGSGKTTVLVNRIANL
IRFGNAYQTEKAPFGVSQELVDELELLLREKGTPSPELAPLLAERPVWPYHILAITFTNK
AAGELKNRLSSMLGEAGQDVHASTFHSACVRILRRDAERLGYPKSFTIYDTDDQQRAMKE
VYKSLNVDDKFIPIKAAMSNIGRLKDKMISPKQALAAPADTRAGLIAKIYDAYQKRLLHA
GAMDFDDLIYQTVRLLQECEDVREFYQSRYQYVLVDEYQDTSVAQFQLVYLLAGAHRNVC
VVGDDDQSIYRFRGATIENILNFEEHFQGAKVIRLEQNYRSTSTILDAANCVIQNNQARK
GKTLWTDNGQGDKILYYEADSEMEEAAHVATVIGQNLRKGAKLRDHAILYRMNAQSGPIE
TYFARAGIPYKIVGGQRFYDRKEIKDIIAYMAVVANRQDDLRLRRIINEPARKIGATTVQ
NAADIASGLGIPMLDVIEHCGEYPALGRAVGALQKFYGIYEQLIKVYETLPLDAFVTELL
DITGYRAMLELAGEEGQTRLENIGQLVSSVKTYADQRGPEASLEGFLEEVALISDIDSYD
DQADVVVLMTMHAAKGLEFDYVFIVGLEEGIFPSEMSRYSNEDLEEERRLCYVGITRARK
ELYLSSANSRMMFGQTKRNKHSRFLDEIDPDLLTVEQSPVARQMQMVRQRYQSDARGGYP
SNNSGVYLNREYNRVPANSTGVNITIKPRQTGTRLTSGIQAGSAIQAGSVAARPQQQVPS
RDGDKNFRVGDLVEHKVFGRGVVQKITPVAGDTIVEIRFEKAGVKKTMANYAPLKKV
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatcgttggataataagtttttagaattgcgaagaaactatattgcatctcag
tttggaaaattgaatgatgttcaaaagcaggccgttttttatacgcaagggcctttgttg
attttggctggtgccggaagcggaaagaccaccgttctggtcaatcgaattgccaatttg
attcgtttcggaaacgcctatcagacagagaaggcgccttttggagtgtctcaggagctg
gtggatgaactggaactattgctccgtgaaaaaggtactccatctccggagctggctccg
cttctggctgagcggcccgtatggccttatcatatactggcgattacctttaccaataag
gcggcgggcgaattaaaaaatcgactgtccagtatgcttggagaagccggacaggatgtt
catgcatccacctttcattcagcatgtgttcgaattttgcggcgtgatgctgaacggctg
ggttatcccaaaagttttaccatctatgatacggacgatcagcagcgggcgatgaaagag
gtctataaatcgctgaatgtggatgataaatttattccaataaaagcggcaatgtcaaat
atcgggcgcttgaaagataaaatgatcagtccaaaacaggcattggcggctccggccgat
acgcgcgcaggcttgattgccaagatctatgatgcctatcagaagcggctgcttcatgct
ggtgccatggattttgacgacttgatttatcaaaccgttcgtctgcttcaggagtgcgaa
gacgtgcgggaattttatcagtcgcgctatcaatatgtgctggtggacgaataccaggat
accagtgtagctcaattccagttggtgtatcttttggcaggcgcacatcgcaatgtgtgc
gtggtaggagatgatgaccaaagtatttatcgtttccgtggcgctaccattgaaaatatt
ctgaatttcgaagagcattttcagggcgcaaaggtgatacgtctggaacagaactatcgc
tccacttccacaattttggatgcggcgaactgtgttattcagaataaccaggcgagaaaa
ggcaaaactctgtggacagacaatggccagggcgataagatcctttattatgaagcagat
tctgaaatggaggaagcagcccacgttgctacggtaatcggccagaatcttcgcaaagga
gccaaactgcgcgaccatgctattctgtaccgtatgaatgcgcagtcaggaccgattgag
acctattttgcccgtgcgggcattccgtataaaattgtaggcgggcagcgcttttatgac
cgcaaggaaatcaaagatattattgcgtacatggccgttgttgccaatcgacaggatgat
ttgcgccttcgccgaatcattaacgagccggcaagaaaaattggagcgactactgttcag
aatgcggcggatattgcaagcgggctgggaataccgatgttggatgttatcgagcattgc
ggtgaataccccgctcttgggcgcgcggtcggcgctttgcagaagttttacggtatttac
gaacagctgataaaagtatatgaaactctgccgttggatgcctttgtaacagaactgctg
gacattacagggtatcgggccatgttggaattggcgggcgaggaaggtcagacacgtctg
gaaaatattggccagctggtttccagtgtgaaaacatatgctgatcagcggggtccggaa
gcttctctggaagggttcctggaagaggttgcgctgatcagcgatattgacagctatgat
gatcaggccgatgtggtcgttttgatgacaatgcacgcagctaaagggctggaatttgat
tatgtgttcatcgtcggccttgaagagggaattttcccaagcgaaatgagccgctattcc
aatgaggatttggaagaggaacggcggttgtgctatgtgggaattacgcgtgcgcgcaaa
gagctgtatctttccagcgctaattcgcgtatgatgtttggccaaaccaagcgaaataag
cattcacgctttttggatgagattgatcctgaccttcttacggtggagcaaagcccggtt
gcacggcagatgcaaatggtgcggcagcgttatcaaagcgatgcaagaggcggttatcct
tccaataattccggagtatatctgaatcgtgagtataatcgtgtacctgccaattcgaca
ggcgtcaatattacgatcaaaccgcggcaaaccggaacgagattgacttccgggattcag
gccggttcggccattcaggcgggcagtgttgcagcacgtccgcagcaacaggtgccttcg
agagatggagataagaatttccgagtgggcgatcttgtggagcacaaggtgtttggtcgc
ggagtggtgcagaagatcacgcccgtggccggagataccattgtggagattcgctttgaa
aaggctggcgtgaaaaagaccatggcgaattatgcaccgctgaaaaaagtttga
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