Owariibacterium komagatae: Ruko_03230
Help
Entry
Ruko_03230 CDS
T10753
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
oko Owariibacterium komagatae
Pathway
oko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Ruko_03230 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oko03400
]
Ruko_03230 (xseA)
Enzymes [BR:
oko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Ruko_03230 (xseA)
DNA repair and recombination proteins [BR:
oko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Ruko_03230 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
At5g52880_ARM
YlqD
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
BFJ83906
LinkDB
All DBs
Position
complement(314927..316141)
Genome browser
AA seq
404 aa
AA seq
DB search
MANVITVTALNRYVKTLLEHDAVLTDIALRGEISNFTNHFKTGHFYFSLRDEQCSVKAVM
FRSYAQQLSFLPQNGMRVIVRGRISLFERDGAFQIYVEDLFPDGIGAMQLAFDQLKEKLE
KEGLFAPEHKKALPQMPHCIGLVTSKTGAAIQDIFNVTRRRYPMAHFLLAPVNVQGSEAA
PGIVDAIRRLDASGKADVIIVARGGGSREDLWVFNDERIARAAYACQTPLVSAIGHEIDF
SILDFVADLRAPTPSAAAELVMPDMRAEWENLYKIYTNIRQEMHQKIHLCYNRLDSAVQA
PAFSAVRLLPEQKRTSLIEKKSVLHQHVSSLQKQRRQKLAHWAELCHSLNPYSVLARGYA
VVEKQGEMIKDSQKLNKGDKLHIRLEKGSTDCIVEQVYSDEVCS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgtcatcactgtaaccgctctgaaccggtatgtaaaaacacttttggagcac
gatgcggttctgacagatatcgcattgcgtggggaaatttccaactttaccaatcatttt
aaaacagggcatttttatttttccttacgcgatgagcagtgttccgtcaaggcagtcatg
ttccgcagttatgcacagcagctgtcattcctgccgcaaaacggaatgcgcgtgattgtt
cgtggcaggatttcgctgtttgagcgggacggcgcattccagatatatgtagaggatttg
ttcccggatggcattggtgcgatgcaacttgcgttcgatcagctgaaggaaaagctggaa
aaagaagggctttttgcaccggagcacaaaaaagcgctgccgcagatgccccattgcatt
ggtctggttacgtccaaaacaggtgcagcaattcaggacatttttaacgttaccagacgg
cgttatccaatggcacatttcctgctggctccagtgaatgtacagggaagcgaggctgcg
cctggaatcgtcgatgcgattcgccgcttggatgccagtgggaaggcggatgtcatcatt
gtggcacgcggtggtggttcgcgtgaagacctttgggtatttaatgatgagcggattgcc
cgggcggcctatgcctgccaaacaccgctggtttctgcaattggtcacgaaatcgatttt
tcgattttggactttgtggctgatctccgtgcgcctactcccagtgcagcagccgaactg
gtgatgccggacatgcgtgcggagtgggagaatttatacaaaatatatacgaatattcgc
caagaaatgcaccagaagattcatttgtgctataatagactcgatagtgcggttcaagca
ccggccttttctgcagtacgcttgctgccggagcagaaaagaacttctttgattgagaaa
aagtctgtgttgcatcagcatgtttcatctcttcaaaaacagcgacgacagaagcttgca
cattgggcggagctgtgtcattccctgaatccatacagtgttttggccagaggatacgct
gtggtggaaaagcagggggaaatgataaaagattcgcagaaactgaacaaaggggacaag
ctccatattcgtttggaaaagggaagtactgattgcatagttgagcaagtatattccgat
gaggtatgttcatga
DBGET
integrated database retrieval system
