Owariibacterium komagatae: Ruko_04420
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Entry
Ruko_04420 CDS
T10753
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
oko Owariibacterium komagatae
Pathway
oko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ruko_04420 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oko03400
]
Ruko_04420 (priA)
Enzymes [BR:
oko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ruko_04420 (priA)
DNA repair and recombination proteins [BR:
oko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ruko_04420 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
DZR
Zn_ribbon_15
AAA_16
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
BFJ84025
LinkDB
All DBs
Position
complement(447559..449811)
Genome browser
AA seq
750 aa
AA seq
DB search
MAITAQVAVAGATIHFDKLYTYLVPDVLSERVQIGSMVLVPFGRGSAKARMGVVLAVDCQ
EQPDKRLKAIYDVAPEEARLSPELLELVHELREKTFCTYYEAVKAVIPYGAQYKAVNEGG
KPRLQKQIVRHTENVYQRGAVPSKWTSKQRAVWDALEQGPLTQTQLLEIGISKNVLDRMC
AQGTLIRTQRDRTLSLYEHYTASGETPALSPAQQKAFVQLASFMDDENPHAALLHGVTSS
GKTLVFLKLIEKAIAQGKQALVLVPEISLTPQMIYRLKTAFGSRVAVQHSALSNTERLLQ
WREIQTGGADIVVGTRSAIFAPLSRIGVIIIDEEQEHTYHSENAPRFLAHDIAKRRAVTH
RALLLLASATPSIESYHAACAGRYHLVELTERYNRMPLPDVAMVDMREELAQGNSGAISN
RLAQELQRNLDCGEQSILLLNRRGYKTVGMCTACGEVIKCDACSVPMVYHKADHKLLCHY
CGKSISPVPEICPTCGGKMKYTGFGTQRVEEELKERFPRARVLRMDLDSTSGKNAHETML
RRFANGEYDIMLGTQMVAKGLDFEKVTLVGVLGIDQLLFAQGFRAFENVFSLITQVVGRG
GRSDRPGRALIQTVDPQHPVLKLAACQDYRSFYDQEIQFRKLNLYPPFCAICMVGFSGAE
DEKVMRAAYEFAQLVQKNARRMTNVPLRVLGPAPMNVAMVNHHYRYKLTLKCRNDTAFRK
LMRAVLDAYNEKGLASQASVYLDFYSDADI
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
ttggcaatcacggcacaggtagcggtggcgggagctaccattcattttgacaaactttat
acctatctggtgccggatgttttgtctgagcgtgttcagatcggcagtatggtccttgtt
ccgttcggacgcggcagcgccaaagcaaggatgggtgttgttctggcagtggattgccag
gaacagccggacaagcgactgaaagcaatttacgatgttgcccccgaagaagcgcgtctt
tctccggaacttttggaactggtgcatgagttgagagaaaagaccttttgcacatattac
gaagcggtaaaagcggtgatcccctatggcgcgcagtataaagcggtaaatgaaggggga
aaaccgcggcttcaaaagcaaattgttcggcatacagaaaatgtataccagcgtggagcc
gttccgtccaaatggacttcaaaacagcgtgcggtgtgggatgctttggagcaagggccc
ttgacgcagacgcagctgctggaaatcggaatcagcaaaaatgttttggatcgtatgtgt
gcgcagggaactctgatccgcacccagcgtgaccgtacgctttctctgtatgaacattac
accgcgtctggagaaacgcctgcgctgagtccggcccagcaaaaggcttttgttcagctg
gcttctttcatggatgacgaaaatcctcatgccgctctgttgcatggggtcacctccagc
ggaaaaacgcttgtatttttgaaattgatcgaaaaggcaatcgcgcagggaaaacaggca
ttggtgcttgtgccggagatatcgctgacgccgcagatgatttatcgcttaaaaacggcc
tttggcagccgggtggcggttcagcattctgcgctttccaacacagagcgccttcttcaa
tggcgggagattcaaacgggcggcgcggatattgtggtggggacccgcagtgcgattttt
gcaccgctttcacggattggtgtcattatcatcgatgaagagcaggagcacacataccat
tcggaaaatgctccgcgctttttggcacacgacattgccaagcgccgcgcagtaacacat
cgtgctttgttgctgcttgccagcgcaacaccgtcgattgagagttatcatgcagcctgt
gccggccggtatcatttggtggaactgaccgaacggtacaacagaatgccgttgccggat
gtggccatggtggacatgcgggaagagctggcgcaggggaattccggtgcgatcagcaac
cgcttggcacaggagctgcagcgcaatctggattgcggagaacaaagtattttactattg
aatcggcgcggttataaaacagtgggaatgtgtaccgcatgcggcgaagtgatcaagtgc
gatgcatgcagtgtcccgatggtgtatcataaagcagatcataaattgctgtgtcattac
tgcggaaagagcatttcaccggtgccggaaatctgcccgacctgtggcggaaaaatgaag
tataccgggtttggaacacagcgtgtggaagaggagttaaaagaacgcttccccagggcg
cgcgtcctgcgtatggatttggattccacgtccggaaagaatgctcacgagaccatgctt
cgccgttttgcaaacggcgaatacgacattatgctcggtacgcaaatggtagccaagggc
ttggattttgaaaaggtaacgctggtcggggttctcggcattgatcagttgctgtttgcg
cagggatttcgcgcgttcgaaaatgtgttcagtctgatcacgcaggtggttggacgcggt
ggacggtccgatcgtccgggccgcgcgttgattcaaacagtagatccgcagcatccggtg
ctgaagctggcggcctgccaggattaccgttcgttttatgaccaggaaattcagtttcgc
aaattgaatctttacccgcctttttgtgccatttgcatggtgggattcagcggggctgag
gatgagaaggtgatgcgcgccgcttacgaattcgcgcagctggtacagaaaaatgcccgg
cgcatgacgaacgtcccgctgcgggtactggggcctgcgcccatgaacgtggcgatggtc
aatcaccattatcgatataaattaacgttgaaatgccgcaacgatacggcttttcgaaaa
ctgatgcgtgcagtgctggacgcatacaatgaaaagggacttgcatcgcaggcttcggtt
tatcttgacttttattccgatgcggatatttga
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