Owariibacterium komagatae: Ruko_04660
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Entry
Ruko_04660 CDS
T10753
Symbol
dacF
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase DacF
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
oko Owariibacterium komagatae
Pathway
oko00550
Peptidoglycan biosynthesis
oko01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oko00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ruko_04660 (dacF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oko01002
]
Ruko_04660 (dacF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oko01011
]
Ruko_04660 (dacF)
Enzymes [BR:
oko01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Ruko_04660 (dacF)
Peptidases and inhibitors [BR:
oko01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Ruko_04660 (dacF)
Peptidoglycan biosynthesis and degradation proteins [BR:
oko01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Ruko_04660 (dacF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
BFJ84049
LinkDB
All DBs
Position
complement(467103..468266)
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AA seq
387 aa
AA seq
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MKRTVIWKNFTALMLVATICLGLAAPHAWAENSTELNLPCRNAILVNVNTGTVLYEQGPD
DEVPIASITKVMTLLLTLEAVKAGKVSMTDIVPISEHAYNMGGSQIWLEPGEQFTLDELI
KAICVCSANDAAVAVAEFVGGSEPVFAEMMNAKAKELGMNHTHFVNACGLDEAGHYSSAR
DVSIMSMELLKHPKILEYCGIWMDSLRNGETQMVNTNKLLKSYPGITGLKTGTTNGAGVC
ISASAERDGMSLLAVVLGSPSSGERFEAATQLLDYGFANYETAEFPSIAGRVETLPVKGG
VSQQVTLSYEIPEKILLKKGEGKTLTAETTLPQQMEAPVQKGEKVGEVTLKTEQSVIGTY
PVTAAGDVSKMDFSTAFSLLSHAIFTL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggacagtcatatggaaaaatttcacggcgcttatgcttgtcgcgacaatttgt
ctggggttggcggcaccgcacgcctgggcggaaaattccaccgaactgaatctgccttgc
agaaacgccatcctggtcaatgtgaatacgggaacggtactctatgaacaggggccggat
gacgaagtcccgatcgcatccattacaaaagtgatgacgcttcttttgacactggaggca
gtgaaagcgggaaaggtttccatgacggatattgttccgatttcggaacatgcctataat
atggggggcagccagatttggctggagccgggagagcagttcacgctggatgaattgatc
aaagcaatctgtgtatgttcggcaaatgatgcagctgtggctgtggcggaatttgtgggc
ggatcggagcccgtgtttgcggaaatgatgaacgccaaggcaaaagaattggggatgaat
cacactcattttgtaaacgcctgcggattggatgaagcggggcactattcttctgcgaga
gatgtgtcgatcatgtcgatggagttgctcaaacaccccaaaattctggagtactgcgga
atttggatggacagcttgcgcaacggcgaaacacagatggtaaacaccaataaacttctg
aaaagctacccgggaattaccggcttgaaaacgggtaccacaaatggcgcgggcgtgtgt
atttccgcgtctgccgaacgcgacggaatgagtcttctggcggttgtgctgggctctccg
tccagcggagagcgatttgaagcggcgacgcagcttctggattacggctttgccaactat
gaaacggcggaatttccgtcgattgccggaagagtggagacacttccggtcaaaggtggt
gtcagtcaacaggtgacgctctcttatgagataccggagaagattctgctgaaaaaggga
gaagggaagacattaacggctgaaacgacgcttccccagcagatggaagctccggtccag
aagggggaaaaggtgggagaagtgaccctgaaaacggagcagtccgtcatcggcacgtac
ccggtgacggcagcgggcgatgtttcaaaaatggatttttcaacggctttttctttgctt
tcccacgcgatatttactttataa
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