Owariibacterium komagatae: Ruko_05410
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Entry
Ruko_05410 CDS
T10753
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
oko Owariibacterium komagatae
Pathway
oko00550
Peptidoglycan biosynthesis
oko01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oko00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ruko_05410
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oko01011
]
Ruko_05410
Peptidoglycan biosynthesis and degradation proteins [BR:
oko01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Ruko_05410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
PBP_dimer_2
Anti-TRAP
Zemlya
Motif
Other DBs
NCBI-ProteinID:
BFJ84124
LinkDB
All DBs
Position
complement(550628..552961)
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AA seq
777 aa
AA seq
DB search
MKGPDKRQQLNEDGNNPPTKPQSSVSFGMRVRAGIVAGFFALFSCLLIFNLFNLQVIDEK
GYAEQAEDQQLKDETITPNRGVIYDTNMKVLARSATVWDVTASTRDMATYGTDIDTVARN
LSQILEMDETELVTKLMENPDSNYVLIKRKVEKPVADAITSWMDEYNNTEGNEDHPITGI
YLTQTSKRYYPYGNLASSVLGFTNVDGNGVTGLELYYNETLKGVEGRILSTENAWGYELA
NNNYQAKYDAQDGYSLVTTIDETIQSCLEKYLYNAVVEHNVERGMGIVMNVNTGEIYGMA
TEPDFNLNDPYTLYDTELANQIAAIEDTTEQNKQLQAAWQSMWRNRAVSDILFPGSVFKV
ITASAALDSGKATVDTTFEACTGRIKVASNPDVYMNCAEHSGHGVLNLAQGLDNSCNPYF
IQLGWQMGADTFCDYLQAFGFTERTGIDMYDEAVSQTVSRENMTAVSLASSAFGQTSAVT
PIAMITAISAAVNGGNLVQPHVVRQVLDSDGNIVETIGTTVKRQVISETTSQTICSILED
SVDNGHGKNAHVPGYRVGGKSGTSQKNQGLSGEDDEQTYIASFVGFAPADDPEIAVLIVL
DNPNSPTGSTYGGSLAGPVVQNILSETLPYLGFEPEYTEEELAVVASPVPDVVGALANNA
LSTLHNAGFNGKIVGSGTTVTYQYPAAGISVNRQSTIILYTDEGATGTMVQVPNVVGQSI
RVATEMLEAAGLNISITGTNDESSGTVVAALQRIEPGTEVEMGTVVEVEFHDTSATD
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggcctgacaaacgccaacaacttaatgaggacggcaacaacccgccaaccaag
ccgcaaagcagcgtcagttttggcatgcgcgtgcgcgccggaatcgtggcgggatttttt
gcactgttttcctgcctgctgattttcaacctgttcaatctccaggtgatcgacgagaag
gggtatgcggaacaggcggaagaccagcagttgaaagacgagaccattaccccgaaccgc
ggcgtgatttatgataccaacatgaaagtgctggcgcgcagtgcgaccgtgtgggatgtg
actgcgtccaccagagatatggcaacctacggcaccgatattgatacggtggcccgaaac
ctcagccagattttggagatggatgagacagagcttgttacaaagcttatggaaaacccg
gattccaactatgtgctgatcaagcgcaaggtggaaaagccggtcgcggatgccattacc
tcctggatggatgaatacaacaacacagagggcaacgaggaccatcccatcaccggaatt
tatctgacgcagaccagcaaacggtattacccctatggaaatctggcgtccagtgttttg
ggcttcaccaatgtggacggcaacggcgtcacggggctggaactttactacaacgaaacg
ctgaaaggggtagaaggccgcattctgtccacggagaacgcatggggatacgagctggcc
aataacaactatcaggccaagtacgatgctcaggacggctacagccttgtcacgaccatt
gacgagacgattcaaagctgccttgaaaaatatctgtacaatgcagtggtggaacacaac
gtagaacgcggcatgggcatcgtgatgaatgtcaataccggcgagatttacggaatggca
acagagccggacttcaatctgaacgatccctatacgctgtatgatacggagctggccaat
cagattgcggcgattgaggatacaactgagcagaataagcagcttcaggcggcgtggcag
agcatgtggcgcaaccgggcggtctcggatatcttgttcccgggttctgttttcaaggtg
atcactgcatcggctgcactggattccggcaaggcaaccgtggatacgactttcgaagcg
tgcaccgggcgcatcaaagtagccagcaacccggacgtgtatatgaattgcgcggagcac
agcggccatggcgttttgaacctggcgcagggcctggacaactcctgtaacccgtatttc
attcaattgggctggcagatgggcgctgatacattctgcgattatctgcaggcgttcgga
tttacggagcgaacgggaatcgatatgtacgatgaggcggtcagccagaccgtcagccgt
gaaaacatgacggcggtttctctggcatcttccgcattcggtcagaccagtgctgtgacg
cctattgcaatgatcactgcgatttccgcggcggtcaacggcggcaatttggtacagccg
catgtggtgcgccaggtgctggattctgacggcaatattgtggagaccattggcactacg
gtcaaacgtcaggttatcagtgaaaccacaagccagaccatttgcagcattctggaagac
agtgtagacaacggccacggcaagaatgcgcatgttccgggctaccgcgtgggcggaaaa
tccggtaccagtcagaaaaaccaaggcctcagcggtgaggacgatgagcagacttacatt
gcttcgttcgttggctttgcaccggcggatgatccggagattgcagtcctgattgttctg
gataatccgaacagccccaccggcagtacctatggcggttctctggcaggtccggtggtt
cagaacattctcagcgagacgcttccgtatctgggcttcgagccggaatacaccgaagaa
gagttggcagttgtggccagcccggttccggatgtggtcggtgcgctggcgaataatgcg
ctgagtacgcttcacaatgcagggttcaacggtaagatcgtagggtccggcacaacggta
acctatcagtatccggcggccggaatcagtgtcaatcgtcagtcaacgattattttgtac
acggatgaaggtgcgaccggaacgatggttcaggttccaaatgtggttgggcagagcatt
cgcgttgcgacggaaatgctggaggcagcaggattaaacatcagtatcacaggtaccaac
gatgagtcttccggcacggtcgtggcagcacttcagagaattgaacccggcacagaagta
gaaatgggcaccgtggtggaagtggaattccacgatacatctgctacggactga
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