Owariibacterium komagatae: Ruko_06280
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Entry
Ruko_06280 CDS
T10753
Name
(GenBank) bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
oko Owariibacterium komagatae
Pathway
oko00900
Terpenoid backbone biosynthesis
oko01100
Metabolic pathways
oko01110
Biosynthesis of secondary metabolites
oko03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
oko00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Ruko_06280
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Ruko_06280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
oko03011
]
Ruko_06280
Enzymes [BR:
oko01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
Ruko_06280
Ribosome [BR:
oko03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Ruko_06280
Bacteria
Ruko_06280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
IMD
PCB_OB
RNase_II_C_S1
MTRES1_C
Motif
Other DBs
NCBI-ProteinID:
BFJ84211
LinkDB
All DBs
Position
complement(628489..630426)
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AA seq
645 aa
AA seq
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MEIIRAKTAGFCFGVDRAVKLTYDLLEQGHKVATLGPLIHNPQCVADLEAKGAVTVDDAA
DLPAGFEVVIRSHGVPASVYESLRAQGAVVHDATCPFVAKIHRLAQRAGEEGKPLLVAGD
STHPEVVGIVGHTTGPVFVFSNLEELERLNLPEISKNGGFVVAQTTFEAKKWRECVEFLK
KVYTNLEIFDTICNATWARQHEAECLARQCDLMIIIGGRHSSNTQKLVTVAGHYTKAVSI
ETAAELQKGWFDGVQKVGVTAGASTPSSIIEEVLSSMSEEIREEELSFEEMIDASLKPIY
NGKVVKGIVTAVAPSEIQVDIGTKQTGFVKLEELTNDPSAKAEDLVKKGDELDLIVTKVN
DQEGIVYLSKKRFDENKGKEEVAAAVESGEIMDGYVTEANSGGLVALVKNVRVFIPRSQA
TLRHSEDYTALVKQNVKLKIKQCEGRHIVGSIREVLAEEADKKREAFWSDVEIGKKYTGV
VKSLTNYGAFVDIGGVDGLVHISELSWNRIKHPSEVVNVGDTIEVYVKDLDTENKKVSLG
YKKAEDNPWEKFKAEYPIGSEFTAPVVSITKFGAFVRILPGVDGLVHISEISRERVEKVP
DVLSVGQEVRVKLIDVDYDKKRISLSMKALLADDAAEEAEETEAE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcagagcaaaaacagccgggttctgcttcggcgtagaccgggcggttaaa
ttgacctatgatcttttggaacaggggcacaaagtggcaacacttggcccgctgatccat
aatccgcagtgtgtggcggaccttgaggcaaagggcgcggtgacagtggatgacgcggcg
gatctgccggcaggttttgaagttgtcatccgaagccatggtgttccggcgtctgtgtat
gagagcctgcgggcacagggagctgtggtgcacgatgcgacctgtccctttgtggcaaaa
attcatcgtctggcacagcgtgccggagaagagggaaaaccgcttttggtggcgggtgac
agtacgcatccggaagttgttggaatcgtggggcataccaccggaccggtttttgttttt
tcaaatttggaagaactggaacgcttaaatttgccagaaatttccaaaaatggaggattt
gtggttgcgcaaaccacttttgaagcaaaaaaatggcgggaatgtgtagagtttctcaaa
aaagtctatacaaatctcgagatatttgatacaatatgtaatgctacatgggcgaggcag
cacgaggcagagtgtttggccagacagtgcgatctgatgatcatcattggcggtcggcat
tcttccaatacccaaaagctggtcacagtggcagggcactacacaaaagcggtttccatt
gagaccgcagccgaactgcaaaaaggttggtttgatggagtgcagaaagtcggtgtgacc
gcgggtgcgtctacaccgtcgtctattattgaggaggtactgagcagtatgagcgaggaa
attcgtgaagaggaactgagctttgaggagatgatcgacgcttccttgaagccgatttac
aacggaaaggtcgtcaagggcattgtcaccgctgtggctcccagcgagatccaggttgac
atcggcacgaagcagactggtttcgtcaagcttgaggaactcactaatgacccttctgcc
aaggcggaagatctggtcaagaaaggtgacgagctcgacctcattgtgacgaaagtgaac
gaccaggaaggcatcgtctacctgtccaaaaagcgttttgatgagaacaagggcaaagaa
gaagtggctgctgctgtggaaagcggtgagatcatggacggttatgtcaccgaggcaaac
tccggcggtttggttgcgctggtgaaaaatgtccgcgtgttcattccccgttctcaggcc
acgttgcgtcacagcgaggattacaccgcgctggtgaaacagaatgtgaaactgaaaatc
aaacagtgcgagggtcgtcacattgtgggttccatccgcgaagtgctggcggaagaggcc
gacaagaagcgcgaggcgttctggagcgacgttgagatcggcaagaaatataccggcgtt
gtcaagagcctgaccaattacggcgcgtttgttgacatcggtggtgtggacgggctggta
catatcagcgagctgtcctggaaccgcatcaaacatccttctgaggttgtgaatgtgggc
gacaccatcgaggtttatgtgaaagatctggatacggagaacaagaaggtttctctgggc
tacaagaaggctgaggacaatccttgggagaaattcaaagccgagtatcccattggcagc
gagttcacggctccggttgtttccatcaccaagtttggtgcgtttgtacgcatcctgccc
ggtgtggatggactggtacacatcagcgagatttctcgcgagcgcgtggagaaagttccc
gatgtgctcagcgtgggtcaggaagttcgcgtgaaactgatcgacgtagattatgacaaa
aagcgcatcagcctttccatgaaggcgctgctggcggatgacgcggctgaagaagctgaa
gagaccgaggcggagtaa
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