Owariibacterium komagatae: Ruko_12870
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Entry
Ruko_12870 CDS
T10753
Name
(GenBank) sugar diacid recognition domain-containing protein
KO
K02647
carbohydrate diacid regulator
Organism
oko Owariibacterium komagatae
Brite
KEGG Orthology (KO) [BR:
oko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oko03000
]
Ruko_12870
Transcription factors [BR:
oko03000
]
Prokaryotic type
Helix-turn-helix
Other families
Ruko_12870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_23
HTH_20
GAF_2
HTH_1
GAF
Lsr2_DNA-bd
SpoVT_C
Motif
Other DBs
NCBI-ProteinID:
BFJ84870
LinkDB
All DBs
Position
complement(1317124..1318293)
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AA seq
389 aa
AA seq
DB search
MFLDAPVAQKLVDRMMESLGCNVNMMDGRGVIIASGEPDRIGKLHVGACLVLERKETVQC
FDTTDAGAESTQPGINMPLCHAGEVVGVVGVTGDPHQLEHMARLVKLTAELLMEQEFAND
QKLSDQTAKTSYVNRLISLASPQDAQSVRLWAERHGYDMDQPRAVCLLAAQPLAGRRRPS
SMHDAVLRSVERMPGFSAQDIAAYLGGKQVVLLKTAPAGRTRQARAELERFFETLRADCA
SQGIALRMVCGSVASAMERVPESFEEARFLMGWPGCAAPGIYHIQDWLLCWMVRHMPDLR
RSEALREGLGLLRQDEELAKTVIALSSSEMSPSAAAERLYIHRNTVAFRMQRLKEQTGLD
PLHCESDRLRLHILAALLQIDRENVEADT
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtttctggacgcacctgtggcccaaaagctagtggatcgaatgatggaaagcctgggc
tgcaacgtaaatatgatggatgggcgcggtgtgattatcgccagcggagaaccggaccgg
atcggaaagcttcatgtgggcgcatgccttgttctggagcgaaaagagaccgtccagtgc
tttgacaccacagatgccggcgcggaaagtacgcagccgggcatcaatatgcccctgtgc
catgcgggcgaagtggtgggtgttgtgggtgtcacgggcgatccgcaccagctggagcat
atggcacgtcttgtgaaactgacggcggaactgctgatggagcaggaatttgcaaatgat
cagaaactcagtgatcagacagcaaagaccagttatgtgaaccgtttgatctctctggcg
agcccgcaggatgcacagagcgttcgcctttgggcggaacggcacgggtatgatatggac
cagccgcgtgcggtctgcctgcttgcggcacagccgctggcaggccgccgccgtccgtcc
tccatgcacgacgcggtgctgcgcagtgtcgaacggatgccgggcttttcggcgcaggac
atcgcggcatatctgggcggaaagcaggtggtgctgctgaagacagcgccggcaggtcga
acccggcaggcccgcgcggaactggagcgtttttttgaaacgctgcgcgcggattgcgct
tcacagggcatcgcactgcgcatggtctgcggcagcgtggcttcggcaatggaacgtgtg
ccggaaagctttgaagaagcccggttcctgatggggtggcctggatgcgctgccccgggg
atttaccacattcaggactggcttttgtgttggatggtccggcatatgccggacctgagg
cggtcggaggcactgcgtgaaggtctgggtttgctgcgtcaggatgaagaactggccaaa
acagtgatcgcgctcagttccagtgaaatgagccccagtgctgcggcagagcgattgtac
attcaccgcaacaccgtggcgtttcgtatgcagcgcctgaaagaacaaaccggcctggac
ccgttgcattgtgaaagcgaccggctgagacttcatattttggcggcacttctgcagatc
gatcgggagaatgtggaggcagacacatga
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