Owariibacterium komagatae: Ruko_13690
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Entry
Ruko_13690 CDS
T10753
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
oko Owariibacterium komagatae
Pathway
oko03030
DNA replication
oko03410
Base excision repair
oko03420
Nucleotide excision repair
oko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ruko_13690 (polA)
03410 Base excision repair
Ruko_13690 (polA)
03420 Nucleotide excision repair
Ruko_13690 (polA)
03440 Homologous recombination
Ruko_13690 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oko03032
]
Ruko_13690 (polA)
03400 DNA repair and recombination proteins [BR:
oko03400
]
Ruko_13690 (polA)
Enzymes [BR:
oko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ruko_13690 (polA)
DNA replication proteins [BR:
oko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Ruko_13690 (polA)
DNA repair and recombination proteins [BR:
oko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Ruko_13690 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ruko_13690 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BFJ84952
LinkDB
All DBs
Position
1404094..1406625
Genome browser
AA seq
843 aa
AA seq
DB search
MKLLVLDGNSIVNRAFYGIKLLTTKDGRYTNALVGFMNILLKLQAEQNPDEVAIAFDLKA
PTFRHKLYDGYKAQRKGMPQELADQMPVLKELLADLGYQMVTCEGYEADDILGTLSAACE
ARGDECVLATGDRDSLQLIGPHTTVLLASTQMGKSVTIPMDEAAVQEKYGVSPRQLIDVK
SLMGDTSDNIPGVTGVGEKTALALIQAFGSLAGVYENLDDARIKRGVREKLVRDKAQAEM
SLTLARIDRAAPVPTEPGAYQRTQPDAAAASALLTGLEMYSTLEKLHLEAASAPQQTAAP
LPQTALQPLTQAPEIGRVFLYFQQDAPIIVYSENVYTSSIDSEAFLDLLANDRVQKECFD
AKAFYRAALRAQRHARGIVFDAKLAAYLLNPSASEYSIAHLAGAYGASPSFACADAPDAP
CLEPLCDALRSACAQQGMESLLNDMELPLAEVLAEMEHTGIQVDKEGIEAFGRELQAALT
AELAAIYEEVGYEFNVNSPKQLGKALFEDLGLPTRKKTKSGYSTSADVLESLRRYTPVID
HILQYRTYQKLNSTYVEGLLKVIGPDGRIHSTFNQTETRTGRISSNEPNLQNIPVRTELG
SRFRRYFTACEGCTLLDADYSQIELRIMAHISGDEHMRQAFADGEDIHRATAARIYGVSP
QDVTPAMRSSVKAINFGIIYGKGAYSLSQDLGISVKEAEAFIQTYLGAYPKVKEYMDATV
AFGKEHGYVATLYGRRRVLPELASSNFNVRAQGERMALNTPIQGTAADVIKLAMVRVFRR
LRDEGLRARLILQVHDELIVECPLEEQKQAARILGEEMRKAADLSVPLVADVNSGDTWYA
AKG
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacttcttgtactggatggaaacagcatcgtgaaccgtgccttctacggcatcaag
ctcctgaccaccaaggacggccgctacaccaacgcccttgtgggcttcatgaacattctt
ttgaaactgcaggccgagcagaacccggacgaagtggccatcgcctttgacttgaaggcg
cccaccttccggcacaaattgtacgacggctataaggcccagcgcaaaggcatgccccag
gaactggccgatcagatgcctgtgctgaaagagctgctggcggacctgggatatcagatg
gtcacctgcgaaggatacgaggccgacgacattctgggtacgctcagcgccgcttgcgaa
gcccggggcgatgagtgtgtgctggccaccggtgaccgggactcgctgcagctgatcggg
ccgcacaccacggtgctgctggcctccacacagatgggcaaaagcgtgaccattcccatg
gacgaagccgccgtgcaggaaaaatacggcgtttccccccggcagctgatcgacgtgaaa
agcctgatgggcgacacgtccgacaacattcccggcgtgaccggcgtgggtgaaaaaacc
gcgctggctctgatccaggccttcggctctctggcgggcgtgtatgaaaatctggatgac
gcgcgcatcaaaagaggtgtgcgggaaaagcttgtccgggacaaagctcaggccgagatg
agcctgacgctggcccgcatcgaccgggcagcgcctgttcccaccgaacccggcgcttat
cagcgcacacagcccgacgcggctgcggccagcgcccttctgaccgggctggagatgtat
tccacgttggaaaaactgcatctggaggcggcttccgccccacagcagaccgctgcgcct
ctgccccagacggcccttcagcccctgacacaggcgccggagatcggccgcgtctttctg
tatttccagcaagatgcccctattattgtatattccgaaaacgtttatacttccagtata
gattcggaagcatttctggacctgctggccaatgaccgggtgcagaaggaatgctttgac
gccaaggcgttttaccgcgcggctttgcgggcgcagcggcacgcccggggcattgtgttt
gacgcaaagctggcggcctatcttctgaacccgtcggccagcgaatattccattgcacat
ctggcgggcgcctatggcgcgtcgccctcttttgcctgcgcggatgccccggacgccccc
tgtctggagcctttgtgcgatgcgctgcgaagcgcttgcgcccagcagggcatggaatcg
ctgctgaacgacatggagctgccccttgcggaagtgctggccgagatggagcataccggc
attcaggtggacaaagagggcattgaagccttcggccgggaactgcaggcggcgctgacc
gccgaactggccgccatctatgaggaagtgggctacgagttcaacgtaaacagccccaag
cagctgggcaaagcgctgtttgaggacctgggcctgcccacccgcaaaaagaccaagagc
ggatactccaccagcgcggatgtgctggaaagtctgcgccggtatacgccggtcatcgac
cacattctgcaataccgcacctatcagaagctgaactccacctatgtggaagggcttttg
aaggtgatcgggccggacgggcgcattcactccaccttcaatcagacggaaacccgcacg
ggccgcatctcttccaacgaaccgaacctgcagaacatccccgtgcgcacagaactgggc
agccggttccgccggtatttcactgcctgtgagggctgcacgctgctggacgcggattac
agccagatcgagctgcgcatcatggcccacatttcgggcgatgagcacatgcggcaggcc
tttgccgacggcgaggacatccaccgggctacggccgcccgcatttacggcgtttcgccc
caggacgtgaccccggccatgcgctcgtcggtgaaagccatcaacttcggcatcatctac
ggaaaaggcgcgtacagtctgtcccaggatctgggcatttccgtgaaggaagccgaggcg
tttattcaaacctatctgggtgcctatcccaaagtgaaggaatacatggatgccaccgtt
gccttcggcaaggaacacggttacgtggccaccctgtacgggcggcgccgggtcctgccg
gaactggcgtccagcaatttcaacgtgcgcgcccagggtgagcgcatggcgctgaacacc
cccattcagggaactgccgcggacgtgatcaagctggccatggtgcgtgtgttccgccgt
ctgcgggacgagggattgcgcgcccggctgatcctgcaggtacacgacgaactgattgtg
gagtgcccgctggaagaacagaaacaggccgcccggattctgggcgaagagatgcgaaaa
gcggcggacctctcggtgccgctggtcgcggatgtaaacagcggcgacacctggtacgcc
gccaagggatga
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