Owariibacterium komagatae: Ruko_25310
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Entry
Ruko_25310 CDS
T10753
Symbol
pepV
Name
(GenBank) dipeptidase PepV
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
oko Owariibacterium komagatae
Pathway
oko00300
Lysine biosynthesis
oko01100
Metabolic pathways
oko01120
Microbial metabolism in diverse environments
oko01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
oko00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Ruko_25310 (pepV)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oko01002
]
Ruko_25310 (pepV)
Enzymes [BR:
oko01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Ruko_25310 (pepV)
Peptidases and inhibitors [BR:
oko01002
]
Metallo peptidases
Family M20
Ruko_25310 (pepV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
Peptidase_M28
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
BFJ86114
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All DBs
Position
complement(2590278..2591672)
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AA seq
464 aa
AA seq
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MNDSQRIQKIDAFIEQNKDALLRDLKTLVCIPSVQSAPEPGAPFGADVRKALDTALDMAR
GFGLETHDCEGYMGYAQITGKSEKQIATIAHLDVVPEGNGWDSNPFDLVERDGYVIGRGT
ADDKGPAVLTLYAAKFFKEQGEELPYTLRILLGCAEETGMEDVDYYLSRYPQPAFCFTPD
GEFPVGYGEKGHYGGTFTSAALTGNLVRMEGGVATNVVPDRAFAIVKADAAGLADTDRVK
VTQEGEGLVRITGYGKGGHASLPEGTVNAIALVVDYLLDHDLCSEEENTVLRMERELLRV
TDGSFAGIDCEDKVFSPLTCIGGTVETRDGRLCQTIDIRYPTCITADEMCEKLSAFAARF
GASFAGEKPAVPFYIEPDSPAIRTLIDTYNEVTGQNKKPFTMGGGTYARHFENAVSFGME
EPQEPMPAFVGAMHGANEGVPVARLLQSLKIYILALSRLMELEF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcacaacgcattcagaaaatcgatgcttttattgaacagaacaaggacgct
cttctgcgcgatttgaagacgctggtgtgcattcccagcgtgcagagcgcacccgaaccc
ggcgcgcctttcggcgccgatgtgcgcaaagcgctggacaccgccctggacatggcccgc
ggtttcgggctggagacccacgactgcgaaggctacatgggctatgcgcagatcacaggc
aaaagtgaaaagcaaatcgccaccatcgctcatctggacgtagtgcccgagggcaacggc
tgggattcaaacccctttgatttggtggagcgggacggctacgtcatcggccgcggcacc
gccgacgacaagggccccgcggtgctgacgctgtatgcggccaagttcttcaaagagcag
ggcgaagagctgccctacacgctgcgcatcctgctgggctgcgccgaggagaccggcatg
gaagatgtggactactacctgtcccgctatccgcagcccgcgttctgtttcacgccggac
ggagaatttccggtgggatacggcgaaaaaggccactacggcggcacatttaccagcgct
gccctgaccgggaacttggtccggatggagggcggcgttgccaccaacgtggtacccgac
cgcgctttcgccatcgtcaaggccgacgcagccggtcttgcggacacggaccgtgtgaag
gtgacacaggagggcgagggcctggtgcgcatcaccggatacggcaaggggggccacgcc
tctctgcccgaggggaccgtcaacgccatcgcgctggtggtggactacctgctggaccat
gacctgtgctcggaagaggaaaacacggtgctgcgcatggagcgcgaactgctgcgcgtg
accgacggctcgtttgcgggcattgactgtgaagacaaggtattctcgccgctgacctgc
atcggcggcacagtggaaacccgggacggccggctgtgccagaccatcgacattcgttat
cccacctgcatcaccgccgatgagatgtgcgaaaagctgagcgcctttgcggcccggttc
ggcgcttccttcgcgggcgaaaaacctgccgtgcccttctatatcgagccggactcccct
gccatccgcacgctgatcgacacctacaacgaagtgaccggccagaacaaaaagcccttc
accatgggcggcggcacctatgcccgccactttgaaaacgcggtcagcttcggcatggaa
gaaccccaggaacccatgcctgcctttgtgggagccatgcacggcgccaacgagggcgtg
cccgtggcccgtcttttgcagagcctgaagatctacattctggccctgtcccgcctgatg
gagctggagttctga
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