Owariibacterium komagatae: Ruko_31180
Help
Entry
Ruko_31180 CDS
T10753
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
oko Owariibacterium komagatae
Pathway
oko00521
Streptomycin biosynthesis
oko00523
Polyketide sugar unit biosynthesis
oko00525
Acarbose and validamycin biosynthesis
oko00541
Biosynthesis of various nucleotide sugars
oko01100
Metabolic pathways
oko01110
Biosynthesis of secondary metabolites
oko01250
Biosynthesis of nucleotide sugars
Module
oko_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
oko00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Ruko_31180 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Ruko_31180 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
Ruko_31180 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Ruko_31180 (rfbB)
00525 Acarbose and validamycin biosynthesis
Ruko_31180 (rfbB)
Enzymes [BR:
oko01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Ruko_31180 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
DUF1233
NifZ
Statherin
Motif
Other DBs
NCBI-ProteinID:
BFJ86701
LinkDB
All DBs
Position
3150025..3151083
Genome browser
AA seq
352 aa
AA seq
DB search
MKKYLITGCAGFIGSNFVYYMLNKYDDILLVNLDKLTYAGNLENLKGVEGDKRHVFVQGD
ICDRELVTGLFEKYDFDFVINFAAESHVDRSITNPEIFVETNVLGTVNLLQCAKNAWYRD
GAWAEGKKYLQVSTDEVYGSLGEDGYFMETTPLCPHSPYSSSKASADMFVMAFHDTYGMP
VNITRCSNNYGPYQFPEKLIPLMINNVKHHKQLPVYGDGMNVRDWLYVEDHCKAIDMVAN
GGRVGEVYNVGGHNERPNIFIVKTIIEQLHDKLQDADINEGLIKYVADRLGHDRRYGIDP
TKIKEELGWYPETAFEVGIVKTIDWYLANEEWMNNVTSGNYQKYYDEMYKNK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatttgattaccggctgtgccggctttattggttccaactttgtctattac
atgctgaataagtacgatgacattttgttggtcaacctggacaaactgacctatgcaggc
aacctggaaaatttgaagggagtggagggcgacaaacgccatgtcttcgtgcagggcgat
atctgcgaccgcgaactggttaccggattgtttgaaaaatacgatttcgattttgtgatt
aactttgcggcggagagccacgtggaccgctccattaccaaccccgaaatttttgtggaa
accaatgtgctgggcaccgtgaacctgctgcaatgcgccaaaaacgcatggtaccgtgac
ggcgcctgggcagagggcaagaaatacctgcaggtatccaccgatgaagtgtacggctct
ctgggcgaggacggctatttcatggagaccacgcccctgtgcccgcacagcccgtattct
tcctccaaggccagcgctgatatgttcgtcatggcgttccatgacacctacggcatgccg
gtgaacatcacccgttgctccaacaactatggtccctatcagttcccggaaaaactgatc
ccgctgatgatcaacaatgtcaagcaccacaaacagctgcccgtgtacggtgacggcatg
aatgtgcgcgactggctgtatgtggaggatcactgcaaagccatcgacatggttgccaac
ggcggccgtgtgggcgaagtttacaatgtgggtggacacaacgagcgtcccaatatcttc
attgtaaaaaccatcattgagcagctgcacgacaaattgcaggatgccgatatcaacgag
ggcctgatcaaatacgttgcggatcgtctgggacatgaccgtcggtacggcatcgacccc
accaagatcaaagaggaacttggctggtatccggagactgcttttgaggtcggcattgtg
aagaccattgattggtatctggccaacgaagagtggatgaataatgttacttctggtaat
tatcagaagtattatgacgaaatgtataaaaacaaataa
DBGET
integrated database retrieval system